Pairwise Alignments

Query, 252 a.a., 3-deoxy-manno-octulosonate cytidylyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 245 a.a., 3-deoxy-D-manno-octulosonate cytidylyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  198 bits (504), Expect = 7e-56
 Identities = 112/243 (46%), Positives = 153/243 (62%), Gaps = 11/243 (4%)

Query: 1   MSFTVVIPARYQSTRLPGKPLADIGGKPMIQWVYEQAMQA-GADRVIIATDDERVEQAVQ 59
           M+ T++IPARY S+R PGKPLA I GKPMIQ VYE+A  A G   + +ATDDER++ AV+
Sbjct: 1   MNVTLLIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTNIYVATDDERIKSAVE 60

Query: 60  AFGGVVCMTSPNHQSGTERLAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAAC 119
            FGG V MTSP+  SGT+R+ + + ++ +  D +V+N+QGD+PLI P  I QV       
Sbjct: 61  GFGGKVVMTSPDAASGTDRINDAINQLGLKDDDLVINLQGDQPLIDPTSIEQVISLFERH 120

Query: 120 SA--PMATLAVEIEDEAEVFNPNAVKVITDKSGYALYFSRATIPWDRDNFAKADKAIVQP 177
                MATL  EI ++AE+ +P  VK++ D   YALYFSRA IP+ RD           P
Sbjct: 121 PGEFEMATLGYEIVNKAELDDPMHVKMVFDNDYYALYFSRARIPFGRDTKD-------YP 173

Query: 178 LLRHIGIYAYRAGFINTYLDWQPSQLEKIECLEQLRVLWHGEKIHVAVALEAPPAGVDTP 237
           + +H+G+YAY   F+  +      +LE +E LEQLR L +G KI VA++       VDTP
Sbjct: 174 VYKHLGVYAYTRRFVQAFAALPLGRLEDLEKLEQLRALEYGHKIKVAIS-AFDSIEVDTP 232

Query: 238 EDL 240
           ED+
Sbjct: 233 EDI 235