Pairwise Alignments

Query, 516 a.a., SpoVR family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 507 a.a., ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) from Shewanella amazonensis SB2B

 Score =  815 bits (2105), Expect = 0.0
 Identities = 380/494 (76%), Positives = 435/494 (88%), Gaps = 1/494 (0%)

Query: 19  LPDGPDWTFELIERYHQEIRRVAELYRLDTYPNQIEIITSEQMMDAYSSIGMPINYNHWS 78
           L DGPDWTFEL+E Y +EI RVA  YRL+TYPNQIE+IT+EQMMDAY+ IGMPI Y HWS
Sbjct: 7   LSDGPDWTFELLEEYQREIERVAAHYRLNTYPNQIEVITAEQMMDAYAGIGMPIGYTHWS 66

Query: 79  FGKKFIQTEQTYKHGQMGLAYEIVINSDPCIAYLMEENTVTMQALVMAHACYGHNSFFKG 138
           FGK+FIQTEQ+YK GQMGLAYEIVINS+PCIAYLMEENT+TMQALVMAHACYGHNSFFKG
Sbjct: 67  FGKRFIQTEQSYKRGQMGLAYEIVINSNPCIAYLMEENTITMQALVMAHACYGHNSFFKG 126

Query: 139 NYLFQTWTDASSIIDYLLFAKNYIAECEQKFGVNEVEKLLDSCHALMNYGVDRYKRPEKI 198
           NYLF+TWTDASSIIDYL+FAKNYIAECEQ+ GV+ VE ++DSCHALMNYGVDRYKRP +I
Sbjct: 127 NYLFKTWTDASSIIDYLVFAKNYIAECEQRHGVDAVENVIDSCHALMNYGVDRYKRPSEI 186

Query: 199 SIAEEKARQEEREAYLQSQVNALWRTVPKKAVEQ-EKQRRFPSEPQENILYFIEKHAPLL 257
           S  EEKARQ+ERE YLQSQVN LWRT+P   VE+ + ++RFP+EPQENILYFIEKHAPLL
Sbjct: 187 SFREEKARQKEREEYLQSQVNDLWRTIPVSQVEKVQPKKRFPAEPQENILYFIEKHAPLL 246

Query: 258 EPWQREIVRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGLLSDKFMLEFLHS 317
           EPWQREIVRIVRK+ QYFYPQKQTQVMNEGWATFWHYTILNHLYDEGL++D+FMLEFL S
Sbjct: 247 EPWQREIVRIVRKMGQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGLVTDRFMLEFLQS 306

Query: 318 HTSVVAQPPYNSRYFSGINPYALGFAMFRDIKRICEEPTEEDKEWFPELAGANWLDALHF 377
           HT VVAQP YNSRY+SGINPYALGF MF DI+RICE PTEED+ WFPE+AG+NWLD LHF
Sbjct: 307 HTGVVAQPAYNSRYYSGINPYALGFNMFTDIRRICENPTEEDRAWFPEIAGSNWLDTLHF 366

Query: 378 AMRNFKDESFISQYLSPKLIRDFKFFAICDDDRKNHIEISAIHDDLGYQQIREKLAAQYN 437
           AM NFKDESFISQYLSP +IR FK F I DD+RKN++ ISAIHD++GY++IR+ ++ QYN
Sbjct: 367 AMENFKDESFISQYLSPAMIRQFKLFGIVDDERKNYLSISAIHDEVGYREIRQTMSQQYN 426

Query: 438 LSNLEPNIQVYSVDVRGDRSLTLQYVPHDRIPLDPSYEEVLKHLHRLWGFEVKLEEVKDT 497
           LSNLEPNIQV+ V+V GDRS+TL+YVP + IPL   Y EVLKHLHRLWGF V LE+ +  
Sbjct: 427 LSNLEPNIQVHRVEVMGDRSMTLRYVPFNNIPLADDYREVLKHLHRLWGFTVVLEQEESD 486

Query: 498 GRREILATCPKKND 511
           G  + LA CP +++
Sbjct: 487 GTIKELARCPPRDE 500