Pairwise Alignments

Query, 516 a.a., SpoVR family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 508 a.a., ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) from Shewanella oneidensis MR-1

 Score =  793 bits (2048), Expect = 0.0
 Identities = 364/493 (73%), Positives = 434/493 (88%), Gaps = 2/493 (0%)

Query: 19  LPDGPDWTFELIERYHQEIRRVAELYRLDTYPNQIEIITSEQMMDAYSSIGMPINYNHWS 78
           L DGPDW+FEL++ Y +EI RVA +Y+L+ YPNQIEIIT+EQMMDAY+ IGMPI Y HWS
Sbjct: 12  LSDGPDWSFELLQSYLKEIERVAAIYKLNAYPNQIEIITAEQMMDAYAGIGMPIGYTHWS 71

Query: 79  FGKKFIQTEQTYKHGQMGLAYEIVINSDPCIAYLMEENTVTMQALVMAHACYGHNSFFKG 138
           FGK+FI+TEQ YK GQMGLAYEIVINS+PCIAYLMEENT+TMQALVMAHAC+GHNSFFK 
Sbjct: 72  FGKRFIETEQGYKRGQMGLAYEIVINSNPCIAYLMEENTITMQALVMAHACFGHNSFFKN 131

Query: 139 NYLFQTWTDASSIIDYLLFAKNYIAECEQKFGVNEVEKLLDSCHALMNYGVDRYKRPEKI 198
           NYLF+TWTDASSIIDYL+FAKNYI++CEQK+G+ +VE ++DSCHALMNYGVDRYKRP +I
Sbjct: 132 NYLFKTWTDASSIIDYLVFAKNYISDCEQKYGIEQVESVIDSCHALMNYGVDRYKRPAEI 191

Query: 199 SIAEEKARQEEREAYLQSQVNALWRTVPKKAVEQEK--QRRFPSEPQENILYFIEKHAPL 256
           S  EE+ARQ++REAYLQSQVN LWRT+P    +Q    +RRFP+EPQENILYFIEK+APL
Sbjct: 192 SFREEQARQKDREAYLQSQVNDLWRTIPTHQQQQPSTTKRRFPAEPQENILYFIEKNAPL 251

Query: 257 LEPWQREIVRIVRKVSQYFYPQKQTQVMNEGWATFWHYTILNHLYDEGLLSDKFMLEFLH 316
           LEPWQREI+RIVRK++QYFYPQKQTQVMNEGWATFWHYTILNHLYD+G++SD+FM+EFL 
Sbjct: 252 LEPWQREIIRIVRKMAQYFYPQKQTQVMNEGWATFWHYTILNHLYDDGVVSDRFMMEFLQ 311

Query: 317 SHTSVVAQPPYNSRYFSGINPYALGFAMFRDIKRICEEPTEEDKEWFPELAGANWLDALH 376
           SHT VVAQP YNSRY+SGINPYALGFAMF DI+RICE PT+ED+ WFP++AG+NWLD LH
Sbjct: 312 SHTGVVAQPEYNSRYYSGINPYALGFAMFTDIRRICEAPTDEDRIWFPDIAGSNWLDTLH 371

Query: 377 FAMRNFKDESFISQYLSPKLIRDFKFFAICDDDRKNHIEISAIHDDLGYQQIREKLAAQY 436
           FAM+NFKDESFISQYLSP++IR FK F I DD+++N++ +SAIHD+ GYQ IR  L+ QY
Sbjct: 372 FAMQNFKDESFISQYLSPRVIRQFKLFGIHDDEKRNYLSVSAIHDEQGYQDIRNLLSQQY 431

Query: 437 NLSNLEPNIQVYSVDVRGDRSLTLQYVPHDRIPLDPSYEEVLKHLHRLWGFEVKLEEVKD 496
           NLSN+EPNIQV++V++ GDRSLTL+YVP+  IPL  SY EVLKHLHRLWGF V LE+V  
Sbjct: 432 NLSNIEPNIQVHNVEINGDRSLTLRYVPNKDIPLAGSYNEVLKHLHRLWGFSVSLEQVNA 491

Query: 497 TGRREILATCPKK 509
                +L+ CP++
Sbjct: 492 DNSVTLLSKCPEQ 504