Pairwise Alignments

Query, 423 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 422 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  604 bits (1558), Expect = e-177
 Identities = 286/421 (67%), Positives = 356/421 (84%), Gaps = 1/421 (0%)

Query: 1   MAQFIDRRLNGKNKSTVNRQRFLRRYKEQIKESVADAVNRRSITNTESGEDVSIPTRDIK 60
           MA FIDRRLN K KSTVNRQRF+ RYK+QIK++V+DAV RRS+T+ + GE +SIPTRDI 
Sbjct: 1   MANFIDRRLNTKGKSTVNRQRFINRYKQQIKKAVSDAVTRRSVTDIDKGEKISIPTRDIS 60

Query: 61  EPMFHQGKGGVRERVHPGNDQFIRGDKIDRPKGGQGSGGSGEGEASADGEGSDDFVFQIS 120
           EP FHQG+GG+RERVHPGNDQF RGDK++RP  G G G SG+G+AS  GEG DDFVFQIS
Sbjct: 61  EPTFHQGQGGMRERVHPGNDQFSRGDKVERPHQGGGQG-SGQGDASNSGEGQDDFVFQIS 119

Query: 121 KDEYLDILFEDLALPNLKKNQVNKITEWKTHRAGFQTSGVPSNISVVRSLQQSLARRTAM 180
           KDEYL++LFEDL LPNL++N++NK+ E++T+RAGF   GVP+NI+++RSL+ SLARR AM
Sbjct: 120 KDEYLELLFEDLELPNLQRNRLNKLVEYQTYRAGFTNDGVPANINIIRSLRSSLARRIAM 179

Query: 181 TAGKRRLMSELEEELERIQRSEPPQIMEEMRIKQEIEELRNKIDSVPFIDTFDLRFKNYE 240
           ++ K+ L+ EL+ ELE ++++   +  + + +K++I EL  KI  VPFIDTFDLR+ N+ 
Sbjct: 180 SSSKKALLKELKAELEALEQTPGSEAEKIIALKEQIAELEAKIAKVPFIDTFDLRYNNFA 239

Query: 241 KRPIPSSQAVMFCLMDVSGSMDQATKDIAKRFYVLLYLFLTRTYENVEVVFIRHHTQAKE 300
           KR +PSSQAVMFCLMDVSGSMDQATKD+AKRFY+LLYLFLTRTY+N+EVV+IRHHTQAKE
Sbjct: 240 KREVPSSQAVMFCLMDVSGSMDQATKDMAKRFYILLYLFLTRTYKNLEVVYIRHHTQAKE 299

Query: 301 VNEHDFFYSQETGGTIVSSALKLMHEIIEARYPLGEWNIYGAQASDGDNWADDSPRCKEL 360
           V+EH+FFYSQETGGTIVSSALKLMHEI   RYP  EWNIY AQASDGDNWADDSP C+++
Sbjct: 300 VDEHEFFYSQETGGTIVSSALKLMHEIQRERYPESEWNIYAAQASDGDNWADDSPTCRQI 359

Query: 361 LSNKLLPYCQYYAYIEITRRSHQTLWHEYEKLQASFDNFAMKNIRSVEDIFPVFRELFQK 420
           L  KLLP  +Y++YIEIT R+HQTLW EYE LQ + DN A+++I+  EDI+PVFRELF+K
Sbjct: 360 LERKLLPVVRYFSYIEITNRAHQTLWREYEGLQKTHDNIAVQHIKQAEDIYPVFRELFKK 419

Query: 421 E 421
           +
Sbjct: 420 Q 420