Pairwise Alignments

Query, 220 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 228 a.a., FIG028593: membrane protein from Pseudomonas fluorescens FW300-N2E2

 Score =  116 bits (291), Expect = 3e-31
 Identities = 67/210 (31%), Positives = 108/210 (51%), Gaps = 4/210 (1%)

Query: 6   IASTIILFI-VLFWVRKDTQHALWPKFRDDKSFQHLTYFVMLGLFLLWSAQASVKEGLSI 64
           +AS  ++++ +L W       A W +   D   QHL +  +L LFLLW  +     G+S 
Sbjct: 12  LASGWLIYVPMLVWA---VSRAPWVELFTDSRRQHLLFGTVLALFLLWLVRRDFDTGVSY 68

Query: 65  HFLALTTLTMMYGWRSAFILTLPVSATLALFGKISFAALPEYLLLSSLLPILISYSIFAL 124
           HF+ +T +T++  W  A +  L     L L G+   AA+     L  L+P+L++     L
Sbjct: 69  HFIGMTAVTLLLDWPLAILGGLFAQLALVLLGRQDMAAVGVNGALLILMPVLVTECCAIL 128

Query: 125 SYHYLPRNIFVFIFVAGFFNAGVTGSLHLLLNSLYIWQLGAYDWITITDNYLIFVPLLAF 184
                PRN+FV+IF +GF  A ++    LLL    +W  G +      ++++ ++ L+ F
Sbjct: 129 VERAQPRNLFVYIFCSGFLAAALSALACLLLGLGLLWYDGIFAMPYWLEDFVGYLWLIIF 188

Query: 185 PEGLLNGMALAILAVFRPEWLRVFSDRDYL 214
           PE  +NGM ++ L VF PEWL  F+   YL
Sbjct: 189 PEAFINGMVISALVVFSPEWLETFNRTRYL 218