Pairwise Alignments

Query, 220 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 225 a.a., Predicted membrane protein from Pseudomonas stutzeri RCH2

 Score =  108 bits (270), Expect = 8e-29
 Identities = 61/189 (32%), Positives = 93/189 (49%)

Query: 26  ALWPKFRDDKSFQHLTYFVMLGLFLLWSAQASVKEGLSIHFLALTTLTMMYGWRSAFILT 85
           A W +   D   QHL    ML +FLLW  +     GLS HF+ LT +T++  W  A +  
Sbjct: 30  APWVELFSDTRRQHLLCGAMLSIFLLWLVRRDFDSGLSFHFIGLTAVTLLLDWPLAILAA 89

Query: 86  LPVSATLALFGKISFAALPEYLLLSSLLPILISYSIFALSYHYLPRNIFVFIFVAGFFNA 145
           L     L L G     AL    +L  L+P++++     +     PRN+FVFIF AGFF A
Sbjct: 90  LAAQLGLTLTGHQHLTALGINGILLVLIPVMVTVICARMVERAQPRNLFVFIFFAGFFPA 149

Query: 146 GVTGSLHLLLNSLYIWQLGAYDWITITDNYLIFVPLLAFPEGLLNGMALAILAVFRPEWL 205
            +     +L +   +   G +      +++  ++ L+ FPE  +NG A+  L VF P+W+
Sbjct: 150 ALAALACILASLGVLLFDGRFPMPPWLEDFAGYIWLVMFPEAFINGTAITALVVFYPDWM 209

Query: 206 RVFSDRDYL 214
             F+   YL
Sbjct: 210 ESFNQSRYL 218



 Score = 21.9 bits (45), Expect = 0.010
 Identities = 9/18 (50%), Positives = 12/18 (66%)

Query: 193 ALAILAVFRPEWLRVFSD 210
           A  I AV+R  W+ +FSD
Sbjct: 21  AALIWAVWRAPWVELFSD 38