Pairwise Alignments

Query, 220 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 226 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  150 bits (378), Expect = 2e-41
 Identities = 83/215 (38%), Positives = 123/215 (57%), Gaps = 16/215 (7%)

Query: 7   ASTIILFIVLFWVRKDTQHALWP-----KFRDDKSFQHLTYFVMLGLFLLWSAQASVKEG 61
           A  + + ++  W+      A+WP         DK+ Q      +  +  LW   AS+  G
Sbjct: 19  AQLLTMAVLALWL-----WAIWPVEDVKALLKDKALQTRLLLAIFFVNALWLIDASITPG 73

Query: 62  LSIHFLALTTLTMMYGWRSAFI-LTLPVS--ATLALFGKISFAALPEYLLLSSLLPILIS 118
           +  HFL L TL +M+GWR A + L LPV+  AT  L   + FA    Y L++  LP+ +S
Sbjct: 74  IHAHFLGLVTLMLMFGWRLATLALLLPVAFFATFMLKLPLDFAI---YGLVAIALPLFLS 130

Query: 119 YSIFALSYHYLPRNIFVFIFVAGFFNAGVTGSLHLLLNSLYIWQLGAYDWITITDNYLIF 178
           Y +++  + YLP ++FV+IF   F NA +    H+L  S +++    YDW  +TDNYL+ 
Sbjct: 131 YVVYSQVFKYLPHHLFVYIFCGAFMNAFLCIVFHILSWSTWLYLTTDYDWAYLTDNYLLL 190

Query: 179 VPLLAFPEGLLNGMALAILAVFRPEWLRVFSDRDY 213
           +PLLAFPE LLNGMA+ ++ V+RPEWL  +SDR Y
Sbjct: 191 IPLLAFPEALLNGMAMTLMVVYRPEWLYDYSDRTY 225