Pairwise Alignments

Query, 220 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 230 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  156 bits (395), Expect = 3e-43
 Identities = 76/209 (36%), Positives = 122/209 (58%), Gaps = 10/209 (4%)

Query: 12  LFIVLFWVRKDTQHALWPKFR-----DDKSFQHLTYFVMLGLFLLWSAQASVKEGLSIHF 66
           L ++  W+     +A+WPK        +K  Q      ++ +  LW   AS++ G+ +HF
Sbjct: 25  LLLLGLWI-----YAIWPKEELLQVVKNKGLQWRLLLTLIAVNTLWLLNASIQAGIHLHF 79

Query: 67  LALTTLTMMYGWRSAFILTLPVSATLALFGKISFAALPEYLLLSSLLPILISYSIFALSY 126
           L + T  +M+GWR A +  L  SA  ++F     A    + L +  LP+  ++ +++ SY
Sbjct: 80  LGIVTCLLMFGWRLATVALLLPSAFFSVFVLKVPAEFGAFGLFAIALPLFCAFMLYSRSY 139

Query: 127 HYLPRNIFVFIFVAGFFNAGVTGSLHLLLNSLYIWQLGAYDWITITDNYLIFVPLLAFPE 186
           H  P+++FVFIFV  F NAG++   H    + ++W    YDW  + DNYL+ +PLLAFPE
Sbjct: 140 HVFPKHLFVFIFVGAFINAGLSTVFHQFSWAFWLWLSTDYDWSMLVDNYLMLIPLLAFPE 199

Query: 187 GLLNGMALAILAVFRPEWLRVFSDRDYLY 215
            LLNGMA+ +L V++P+WL  +SDR+YL+
Sbjct: 200 ALLNGMAVTLLVVYQPQWLFDYSDREYLW 228