Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  168 bits (426), Expect = 5e-46
 Identities = 112/364 (30%), Positives = 201/364 (55%), Gaps = 14/364 (3%)

Query: 237 SSEATAQGVIESTAQRLEEVSSRYQSLAEKAGEQTLLS------ILVACVILAVLTVLLF 290
           + +A  +GV  + ++++  +    + L  +  + TL+S      I++  VI+ V  VL+ 
Sbjct: 146 AGDAAVKGVDRAASEQMSALVVELRKLGTE--QSTLISAGADRTIMLGTVIMLVSGVLIG 203

Query: 291 MMVSFSLSKALTQIGRVL----EKLSSGDLSQRLALISNKKDEFNQLAFAVNKSCENLGG 346
           +   + +++ L Q  R L     +LS G  ++R+   SN++DE   LA A N   + L  
Sbjct: 204 LFSLWLVNRNLVQPIRNLIDYVTRLSHGRFAERVT--SNRQDELGNLAVAANTLRDFLAE 261

Query: 347 LVHVVQDRSVALSGDAVALNQAIDNLVRGQSDVMDQTQRLASATEEVSLTTQQVSHSLEV 406
               +Q  +  L   +  LN     + +G S+  ++T ++A+A  E+S T Q+V+     
Sbjct: 262 TFTRLQRSATELDSASGELNAIASLMSQGTSEQFERTDQVATAMNEMSATAQEVARHAAD 321

Query: 407 VANVSKASTLAAAEGSKVISAAIGSLREVGSILQSAASHIQQLEQASAKVDSVMDIINGI 466
            A  +  +  +A +G KV+   I ++  +   + + A+ I+QLE  S ++  V+++I GI
Sbjct: 322 AARAADDADQSAQQGEKVMQGTIHTITRMRGEIANTATVIRQLETDSGRIGKVLEVIRGI 381

Query: 467 AEQTNLLALNAAIEAACAGEQGRGFAVVADEVRSLAVRTVNAVSEISGTIETMKKESAEV 526
           AEQTNLLALNAAIEAA AGE GRGFAVVADEVRSLA RT +++ EI+  I+T++  + + 
Sbjct: 382 AEQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTASSIIEINQIIQTVQTGAVDA 441

Query: 527 ILFMNQSEQTMEEGQSKGNQAMQALQRITQGTDEAASQTERIFSSIKELSATSQAMAESM 586
              +   +   EE   +  QA   L+RITQ  +       +I ++ +E ++ ++ ++ ++
Sbjct: 442 AHAIESGQSRSEESVEQVTQAGVMLERITQAVEAIRDMNRQIATAAEEQTSVAEDISRNL 501

Query: 587 SQIS 590
           ++I+
Sbjct: 502 TEIT 505



 Score = 33.5 bits (75), Expect = 2e-05
 Identities = 56/266 (21%), Positives = 104/266 (39%), Gaps = 60/266 (22%)

Query: 327 KDEFNQLAFAVNKSCENLGGLVHVVQDRSVALSGDAVALNQAIDNLVRGQSDVMDQTQRL 386
           +DE  QL  A  K            +D  VA  GD+ A + A+  + R  S+ M      
Sbjct: 120 RDEHRQLGAAYQKG-----------RDAFVASGGDSAAGDAAVKGVDRAASEQMS----- 163

Query: 387 ASATEEVSLTTQQVSHSLEVVANVSKASTLAAAEGSKVISAAIGSLREVGSILQSAASHI 446
           A   E   L T+Q              STL +A   + I         +G+++   +  +
Sbjct: 164 ALVVELRKLGTEQ--------------STLISAGADRTIM--------LGTVIMLVSGVL 201

Query: 447 QQLEQASAKVDSVMDIINGIAEQTNLLALNAAIEAACAGEQGRGFAVVADEVRSLAVRTV 506
             L        +++  I  + +    L+     E   +  Q        DE+ +LAV   
Sbjct: 202 IGLFSLWLVNRNLVQPIRNLIDYVTRLSHGRFAERVTSNRQ--------DELGNLAVAA- 252

Query: 507 NAVSEISGTIETMKKESAEVILFMNQSEQTMEEGQSKGNQAMQALQRITQGTDEAASQTE 566
                      T++   AE    + +S   ++    + N A+ +L  ++QGT E   +T+
Sbjct: 253 ----------NTLRDFLAETFTRLQRSATELDSASGELN-AIASL--MSQGTSEQFERTD 299

Query: 567 RIFSSIKELSATSQAMAESMSQISSA 592
           ++ +++ E+SAT+Q +A   +  + A
Sbjct: 300 QVATAMNEMSATAQEVARHAADAARA 325