Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 658 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2

 Score =  178 bits (451), Expect = 8e-49
 Identities = 118/350 (33%), Positives = 182/350 (52%), Gaps = 2/350 (0%)

Query: 275 ILVACVILAVLTVLLFMMVSFSLSKALTQIGRVLEKLSSGDLSQRLALISNKKDEFNQLA 334
           + +  ++  +L V   M +  S    L  + R  E L +GDLS RL + S+  DE  QLA
Sbjct: 310 LAIGSLLAMLLAVGSAMWLLRSKLAPLGDLVRQAEALGAGDLSVRLNVSSH--DEIGQLA 367

Query: 335 FAVNKSCENLGGLVHVVQDRSVALSGDAVALNQAIDNLVRGQSDVMDQTQRLASATEEVS 394
            A N+  + L  +V  ++  S  ++  A AL+        G      +   +A A EE S
Sbjct: 368 RAFNQMSQALSTMVEHIRKASQEVNSRAQALSGLSSGAYEGMEQQSGEITSMAGAVEEFS 427

Query: 395 LTTQQVSHSLEVVANVSKASTLAAAEGSKVISAAIGSLREVGSILQSAASHIQQLEQASA 454
            T+  ++ ++     +++ +      G   +  A  SL ++   L S A+ I  L Q S 
Sbjct: 428 ATSLNIADNMGNTERLAQENAQQTRIGRTSMDEASSSLEQIAGALNSTATVINTLGQRSQ 487

Query: 455 KVDSVMDIINGIAEQTNLLALNAAIEAACAGEQGRGFAVVADEVRSLAVRTVNAVSEISG 514
           ++  ++ +I  IAEQTNLLALNAAIEAA AGEQGRGFAVVADEVRSLA RT  A  EIS 
Sbjct: 488 EIGGIVGVITSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTRQATDEISS 547

Query: 515 TIETMKKESAEVILFMNQSEQTMEEGQSKGNQAMQALQRITQGTDEAASQTERIFSSIKE 574
            I ++++E+   I  M Q    M+EG S+      AL RI + +  A  Q   I ++ +E
Sbjct: 548 MINSIQQETGNAISTMEQGNLLMQEGLSRNANVATALARIDEQSRSAGQQFAAITTATQE 607

Query: 575 LSATSQAMAESMSQISSAMQALESYNTQLRVTSREVETRAESLEHDCRRF 624
            S+T+  ++ ++  I+ A        + L +T++E+E  A+ L  +  RF
Sbjct: 608 QSSTATLLSSNLQSIAMANSEQREVVSNLALTAKELEKLAQDLRQEVDRF 657