Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 559 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  156 bits (394), Expect = 3e-42
 Identities = 103/362 (28%), Positives = 189/362 (52%), Gaps = 8/362 (2%)

Query: 262 SLAEKAGEQTLLSILVACVILAVLTVLLFMMVSFSLSKALTQIGRVLEK------LSSGD 315
           +L E      +  ++++ V +A + +L+  +V   L+ A+ +   +++          GD
Sbjct: 191 ALVEAKVHDRVQGVILSIVGIAAVVLLVIAVVGLLLANAILRPLHLMKDNLDDIAAGEGD 250

Query: 316 LSQRLALISNKKDEFNQLAFAVNKSCENLGGLVHVVQDRSVALSGDAVALNQAIDNLVRG 375
           L++RL + S  +DE  QLA + N+  + + GLV  + D +  L+G    +++      + 
Sbjct: 251 LTRRLTITS--QDELGQLAGSFNRFVDKIHGLVRQITDMTSQLTGLVTQVSEQAQRSEQA 308

Query: 376 QSDVMDQTQRLASATEEVSLTTQQVSHSLEVVANVSKASTLAAAEGSKVISAAIGSLREV 435
                 +T ++A+A  E+S   Q+V+ S +  A  ++ +        +V++ +I  +  +
Sbjct: 309 MERQRHETDQVATAINEMSSAAQEVARSAQGAAVAAQQTDEEGQSAKRVVAGSIQQIHAL 368

Query: 436 GSILQSAASHIQQLEQASAKVDSVMDIINGIAEQTNLLALNAAIEAACAGEQGRGFAVVA 495
            + ++S+   +  L+Q  A + SV+ +I  IAEQTNLLALNAAIEAA AGE GRGFAVVA
Sbjct: 369 VNDIRSSGVSLDSLQQDVASIVSVLGVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVA 428

Query: 496 DEVRSLAVRTVNAVSEISGTIETMKKESAEVILFMNQSEQTMEEGQSKGNQAMQALQRIT 555
           DEVR+LA RT  +  EI G I+ ++  +   +  M +S +  +    + N+A  +L  + 
Sbjct: 429 DEVRALASRTQQSTQEIQGMIDRLQSGTHAAVEAMRRSSEAGDGTSERANEAGASLDTMA 488

Query: 556 QGTDEAASQTERIFSSIKELSATSQAMAESMSQISSAMQALESYNTQLRVTSREVETRAE 615
           Q      S   +I S+ +E +A ++ +  S+ QI+ A+ ++         TSR +    +
Sbjct: 489 QLIGTINSMNAQIASAAEEQTAVAEEINRSVHQIAVAVDSVADETQLGAQTSRSLADLGQ 548

Query: 616 SL 617
            L
Sbjct: 549 RL 550