Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  166 bits (419), Expect = 4e-45
 Identities = 131/553 (23%), Positives = 264/553 (47%), Gaps = 30/553 (5%)

Query: 83  LAQLMQKVEGDKRFLAENNFANEGNALQQAVQAFNDDMQPWLEIKGELGFNVDDGK---- 138
           LA  ++K E  K+       + E    Q A+    +  +    ++ E+G N   G     
Sbjct: 93  LANELKKPENLKKLALIEQASTE---YQVALNTMREAYRTDAAMRKEMGVNAVKGAALIA 149

Query: 139 --LAELKKLAVTIEKKIDETGMVTINSDFQAMIKAQ-QNYLLQPNEQNLRLFNRALAGFV 195
             + +++ +  T E++ +   ++    +  A+++ + + Y   PN    +   R L   +
Sbjct: 150 KVINDVEAMPATDERRFELYRIILKAKEDVALVRYEVRGYTGNPNSATEQAATRQLENAL 209

Query: 196 SMSQSY--AMLDLYKAEIEQFKTTFLRVSELSQQVKDIEKNLLSSEATAQGVIES----- 248
              ++   A    Y   I+Q +T  +         + ++    S++A  + V ++     
Sbjct: 210 KSIETLNGAFGPSYADTIKQLETALIAYR------RSVQNFTASNQAIGKAVQDTIDLGE 263

Query: 249 TAQRL--EEVSSRYQSLAEKAGEQTLLSILVACVILAVLT-VLLFMMVSFSLSKALTQIG 305
           T  RL  E  +S+  SL +++ +  +L +  +C  LA+L  +L  M+++  +++ L    
Sbjct: 264 TITRLTDEMYASQLVSLGDESAQSRILQL--SCTALAMLLGILAAMIITRQITRPLQDTL 321

Query: 306 RVLEKLSSGDLSQRLALISNKKDEFNQLAFAVNKSCENLGGLVHVVQDRSVALSGDAVAL 365
            V++++++GDL+Q    +  + DE   L   + +    L  L+  ++D    ++  A  L
Sbjct: 322 AVVDRIAAGDLTQ--GTVVTRGDELGVLQQGIQRMGTTLRDLIGGIRDGVTQIASAAEEL 379

Query: 366 NQAIDNLVRGQSDVMDQTQRLASATEEVSLTTQQVSHSLEVVANVSKASTLAAAEGSKVI 425
           +   +    G +    +T ++A+A +E+S T  +V+ + E    V+  +   A  G +V+
Sbjct: 380 SAVTEQTSAGVNSQKTETDQVATAMQEMSATVHEVARNAEQACTVASEADAQARIGDQVV 439

Query: 426 SAAIGSLREVGSILQSAASHIQQLEQASAKVDSVMDIINGIAEQTNLLALNAAIEAACAG 485
           + AI  +  + S +  +   + +LEQ SA++  +MD+I  +AEQTNLLALNAAIEAA AG
Sbjct: 440 AQAIVQIERLASEVGRSVDAMDELEQESARIGKIMDVIRAVAEQTNLLALNAAIEAARAG 499

Query: 486 EQGRGFAVVADEVRSLAVRTVNAVSEISGTIETMKKESAEVILFMNQSEQTMEEGQSKGN 545
           + GRGFAVVADEVR LA RT ++  EI   +  ++  + +V   M  S +  +       
Sbjct: 500 DAGRGFAVVADEVRGLAQRTQHSTEEIESLVAGLQNGTRQVSSIMRNSRELTDSSVELAG 559

Query: 546 QAMQALQRITQGTDEAASQTERIFSSIKELSATSQAMAESMSQISSAMQALESYNTQLRV 605
           +A  +L  ITQ      +  ++I ++  + S+ ++ ++ S+  +    +   S + +   
Sbjct: 560 KAGISLGNITQAVSGIQAMNQQIAAAAVQQSSVAEEISRSILNVRDVSEQTASASEETAA 619

Query: 606 TSREVETRAESLE 618
           +S E+      L+
Sbjct: 620 SSIELARLGNQLQ 632