Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 493 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  154 bits (389), Expect = 9e-42
 Identities = 111/376 (29%), Positives = 184/376 (48%), Gaps = 3/376 (0%)

Query: 242 AQGVIESTAQRLEEVSSRYQSLAEKAGEQTLLSILVACVILAVLTVLLFMMVSFSLSKAL 301
           AQ +    +QRL  V ++  SL++  GE+         V++  +     +++ F LS+  
Sbjct: 112 AQVIHRGESQRLA-VLAQGVSLSQVFGERFSQYAAAVFVLMLAMLGASQLLIRFLLSQLN 170

Query: 302 TQIGRVLEKLSSGDLSQRLALISNKKDEFNQLAFAVNKSCENLGGLVHVVQDRSVALSGD 361
           T    +L    +GDLS R+ L    +DE  Q+A A N        +V  V   +  L   
Sbjct: 171 TLKDVMLHVEKTGDLSARVPLAC--EDEVGQMAAAFNAMQAGYQRVVDTVASTARQLDSG 228

Query: 362 AVALNQAIDNLVRGQSDVMDQTQRLASATEEVSLTTQQVSHSLEVVANVSKASTLAAAEG 421
           A  L  +++++  G      +T + A+A  E+S T   ++       ++SK +   A  G
Sbjct: 229 AARLASSMNDVRHGMLGQQSETDQAATAINEMSATVYHIAQHAGATRDLSKTADTLAGNG 288

Query: 422 SKVISAAIGSLREVGSILQSAASHIQQLEQASAKVDSVMDIINGIAEQTNLLALNAAIEA 481
             V++    S+  + S +Q  A  IQ+L + S K++ V+ +I+ IAEQTNLLALNAAIEA
Sbjct: 289 HDVVARVQQSITGLSSGVQQTAEMIQRLAEDSQKINGVVSVIHSIAEQTNLLALNAAIEA 348

Query: 482 ACAGEQGRGFAVVADEVRSLAVRTVNAVSEISGTIETMKKESAEVILFMNQSEQTMEEGQ 541
           A AGE GRGFAVVADEVR+LA R   +  EI+  +  ++  + + + FM +S    ++  
Sbjct: 349 ARAGEMGRGFAVVADEVRNLAKRVQTSTDEITTMVSALQAGTRDAVDFMQESSLKADDCV 408

Query: 542 SKGNQAMQALQRITQGTDEAASQTERIFSSIKELSATSQAMAESMSQISSAMQALESYNT 601
            +  +A  AL +IT    +      +I  + ++ S  ++ M  ++  I    +       
Sbjct: 409 QQAREAGDALAQITAAVAQMRESNTQIAVAAEQQSHVAEEMNRAVVSIRDVTENTVRQTV 468

Query: 602 QLRVTSREVETRAESL 617
               TS E+ T A  L
Sbjct: 469 DSATTSHELATLAGEL 484



 Score = 25.4 bits (54), Expect = 0.006
 Identities = 40/200 (20%), Positives = 89/200 (44%), Gaps = 29/200 (14%)

Query: 75  KVSEIKTRLAQLMQKVEGDKRFLAENNFANEGN--ALQQAVQAFNDDMQPWLEIKGELGF 132
           + +E+  RLA+  QK+ G    +  ++ A + N  AL  A++A            GE+G 
Sbjct: 308 QTAEMIQRLAEDSQKINGVVSVI--HSIAEQTNLLALNAAIEAAR---------AGEMGR 356

Query: 133 N---VDDGKLAELKKLAVTIEKKIDETGMVTINSDFQAMIKAQQNYLLQPNEQNLRLFNR 189
               V D    E++ LA  ++   DE  + T+ S  QA  +   +++ + + +      +
Sbjct: 357 GFAVVAD----EVRNLAKRVQTSTDE--ITTMVSALQAGTRDAVDFMQESSLKADDCVQQ 410

Query: 190 ALAGFVSMSQSYAMLDLYKAEIEQFKTTFLRVSELSQQVKDIEKNLLSSEATAQGVIEST 249
           A     +++Q         A + Q + +  +++  ++Q   + + +  +  + + V E+T
Sbjct: 411 AREAGDALAQ-------ITAAVAQMRESNTQIAVAAEQQSHVAEEMNRAVVSIRDVTENT 463

Query: 250 AQRLEEVSSRYQSLAEKAGE 269
            ++  + ++    LA  AGE
Sbjct: 464 VRQTVDSATTSHELATLAGE 483