Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2C3

 Score =  162 bits (411), Expect = 3e-44
 Identities = 125/462 (27%), Positives = 221/462 (47%), Gaps = 9/462 (1%)

Query: 172 QQNY-LLQPNEQNLRLFNRALAGFVSMSQSYAMLDLYKAEIEQFKTTFLRVSELSQ--QV 228
           Q+ Y LL+   Q +R         +S S   A  D Y   + Q++    R+  LS+  QV
Sbjct: 82  QKTYDLLEQRSQQIRAAQTTYEKLISASDERAAYDQYVQLLGQYRQLEERMKTLSRNNQV 141

Query: 229 KDIEKNLLSSEATAQGVIESTAQRLEEVSSRYQSLAEKAGEQTLLSI---LVACVILAV- 284
            ++   L +   +    I +    L E+++       K   Q   S    +VA +++A  
Sbjct: 142 DELRALLNTELLSNSDAINAAIDHLVEINNLQAEALNKGAAQQYSSAFNWVVALLVIATG 201

Query: 285 LTVLLFMMVSFSLSKALTQIGRVLEKLSSGDLSQRLALISNKKDEFNQLAFAVNKSCENL 344
           LT+L   +++ S++K +       E+++ G+L++ + +  +  DE  +L  A++   E L
Sbjct: 202 LTLLFAWLLTNSITKPIANALDAAEEIAKGNLTRPITV--DGSDEAGRLLRAMSTMQEKL 259

Query: 345 GGLVHVVQDRSVALSGDAVALNQAIDNLVRGQSDVMDQTQRLASATEEVSLTTQQVSHSL 404
              +  +   +  L+  A  LN   D   RG +   ++ ++ A+A  E++   ++V+ + 
Sbjct: 260 RDTLQRISGSATQLASAAEELNAVTDESARGLTQQNNEIEQAATAVNEMTSAVEEVARNA 319

Query: 405 EVVANVSKASTLAAAEGSKVISAAIGSLREVGSILQSAASHIQQLEQASAKVDSVMDIIN 464
              +  SK +T +A +G  ++   +G++  + + +QS A+ I  L   S  +  V+D+I 
Sbjct: 320 VSTSEASKHATTSAGDGRDLVQETVGAIERMSADVQSTATLIGNLANESRDIGKVLDVIR 379

Query: 465 GIAEQTNLLALNAAIEAACAGEQGRGFAVVADEVRSLAVRTVNAVSEISGTIETMKKESA 524
           G+A+QTNLLALNAAIEAA AGE GRGFAVVADEVR+LA RT  + SEI   I +++  + 
Sbjct: 380 GLADQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTQQSTSEIERMIGSIQSGTE 439

Query: 525 EVILFMNQSEQTMEEGQSKGNQAMQALQRITQGTDEAASQTERIFSSIKELSATSQAMAE 584
             +  M  S +  E   +    A  +L  I     E   +   I S+ +E +  ++ +  
Sbjct: 440 HAVDSMRNSTERAESTLNIARGAGLSLDTINTAIVEINERNLVIASAAEEQAQVAREVDR 499

Query: 585 SMSQISSAMQALESYNTQLRVTSREVETRAESLEHDCRRFTL 626
           ++  I        +   Q    S E+   A  L     RF+L
Sbjct: 500 NLVNIRDLSVQSATGANQTTAASAELSRLAVDLNSMVGRFSL 541