Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2E3

 Score =  171 bits (434), Expect = 7e-47
 Identities = 153/633 (24%), Positives = 297/633 (46%), Gaps = 29/633 (4%)

Query: 6   LSQKQKITL-FILVLCLGFIGLAVFTAQSLSKMNSQYQQSGDVT---AGSAALFATQAQL 61
           +S   K++L F LVL L  I LA+    SL  +  +     D+T   AG   L  T+ Q 
Sbjct: 8   ISVNLKLSLGFGLVLALTCI-LALTGWTSLGGLIDRSNWMSDITQLNAGLTKLRVTRLQ- 65

Query: 62  FELAAEREHLSSNKVSEI---KTRLAQLMQKVEGDKRFLAENNFANEGNALQQAVQAFND 118
           + LAA  E ++    + +   K +  +L+  ++  +     N      +A QQ++     
Sbjct: 66  YMLAAGDETVAQTVQTALDGFKAQQQKLLSSLKSPENLKLLNEQGTVIDAYQQSLNKMRS 125

Query: 119 DMQPWLEIKGELGFNVDDGKL------AELKKLAVTIEKKIDETGMVTINSDFQAMIKAQ 172
             +    ++  +G N +            ++++ ++ ++      +      FQ      
Sbjct: 126 AYRTVSSVRQTMGENAESANTLINDIDTRVRQMPLSDQRFEQLLAITEAKEQFQLARYEV 185

Query: 173 QNYLLQPN----EQNLRLFNRALAGFVSMSQSYAMLDLYKAEIEQFKTTFLRVSELSQQV 228
           + Y+   N    ++     + A+A   +++  +A  D  +  + Q ++  L      Q  
Sbjct: 186 RGYIADSNPATEQKAFAQMDAAIASLKTLNTHFA--DSQQDALRQLQSALLNYRNALQAY 243

Query: 229 KDIEKNLLSS--EATAQGV-IESTAQRLEEVSSRYQSLAEKAGEQTLLSILVACVILAVL 285
           K    + + +  E T QG  I + +  L ++    +  AE    +TL   L++ V+  ++
Sbjct: 244 KAANNDAVVARQEMTVQGNDIVTRSDALYQIQLDRRD-AESTQARTLQ--LISTVLALLV 300

Query: 286 TVLLFMMVSFSLSKALTQIGRVLEKLSSGDLSQRLALISNKKDEFNQLAFAVNKSCENLG 345
            VL  ++++  +++ L +   V+E+++ GDL+  + +   ++DE   L   + +    L 
Sbjct: 301 GVLAAVIITRQITRPLRETLAVVERIAGGDLTHDVHV--TRRDELGVLQQGIARMGVTLR 358

Query: 346 GLVHVVQDRSVALSGDAVALNQAIDNLVRGQSDVMDQTQRLASATEEVSLTTQQVSHSLE 405
            L+  ++D    ++  A  L+   +    G +    +T ++A+A  E++ T Q+V+ + E
Sbjct: 359 ELISGIRDGVTQIASAAEELSAVTEETSAGVNSQKIETDQVATAMHEMTATVQEVARNAE 418

Query: 406 VVANVSKASTLAAAEGSKVISAAIGSLREVGSILQSAASHIQQLEQASAKVDSVMDIING 465
             +  + A+   A EG KV++ AI  +  + S +  +   +  L+Q S K+ SVMD+I  
Sbjct: 419 EASQAAAAADGEAREGDKVVNEAIAQIERLASEVVRSTEAMTVLQQESDKIGSVMDVIKA 478

Query: 466 IAEQTNLLALNAAIEAACAGEQGRGFAVVADEVRSLAVRTVNAVSEISGTIETMKKESAE 525
           +AEQTNLLALNAAIEAA AGE GRGFAVVADEVR LA RT  +  EI G +  ++  + +
Sbjct: 479 VAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQKSTEEIEGLVAGLQNGTQQ 538

Query: 526 VILFMNQSEQTMEEGQSKGNQAMQALQRITQGTDEAASQTERIFSSIKELSATSQAMAES 585
           V   MN S    +       +A  +L+ IT+      S  ++I ++ ++ SA ++ ++ S
Sbjct: 539 VAAVMNNSRSLTDSSVELTRKAGVSLENITRTVSNIQSMNQQIAAAAEQQSAVAEEISRS 598

Query: 586 MSQISSAMQALESYNTQLRVTSREVETRAESLE 618
           +  +    +   + + +   +S E+      L+
Sbjct: 599 IINVRDVSEQTAAASDETAASSVELARLGNQLQ 631