Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  161 bits (408), Expect = 7e-44
 Identities = 108/365 (29%), Positives = 195/365 (53%), Gaps = 10/365 (2%)

Query: 248 STAQRLEEVSSRYQSLAEKAGEQTLLSILVACVILAVLT-----VLLFMMVSFSLSKALT 302
           S  Q L  VS       +KA     L+      ++A LT     +LL  M+   L + LT
Sbjct: 246 SRVQGLPSVSWYVGISLDKAKAYAALASFRTSAVVAALTAVGVILLLLGMLMRVLMRPLT 305

Query: 303 QIGRVLEKLSSG--DLSQRLALISNKKDEFNQLAFAVNKSCENLGGLVHVVQDRSVALSG 360
            +GR +  ++ G  DL++RLA+ S  KDEF +LA A N+  E +   +  V   +  ++ 
Sbjct: 306 DMGRAMANIAEGEGDLTRRLAVQS--KDEFGELASAFNRFVERIHTSIREVSSATQQVNE 363

Query: 361 DAVALNQAIDNLVRGQSDVMDQTQRLASATEEVSLTTQQVSHSLEVVANVSKASTLAAAE 420
            A  +  A ++ +    +   +T  +A+A  E+    Q+++ +    +  +  +   A +
Sbjct: 364 VAARVLAASNSSMANSDEQASRTNSVAAAINELGAAAQEIARNAADASQQASGARHQAED 423

Query: 421 GSKVISAAIGSLREVGSILQSAASHIQQLEQASAKVDSVMDIINGIAEQTNLLALNAAIE 480
           G +V+   I ++RE+ + + ++ + I+ L   +  +  ++++I GI+EQTNLLALNAAIE
Sbjct: 424 GRQVVEQNIAAMRELSAKISASCAQIEALNAKTVDIGQILEVIKGISEQTNLLALNAAIE 483

Query: 481 AACAGEQGRGFAVVADEVRSLAVRTVNAVSEISGTIETMKKESAEVILFMNQSEQTMEEG 540
           AA AGE GRGFAVVADEVR+LA RT ++  EI   IE ++  +   +  M +S++  E  
Sbjct: 484 AARAGEAGRGFAVVADEVRNLAHRTQSSAQEIQQMIEQLQVGAGASVQTMTESQRQSESS 543

Query: 541 QSKGNQAMQALQRITQGTDEAASQTERIFSSIKELSATSQAMAESMSQISSA-MQALESY 599
            S  ++A + L  +TQ   E     + + ++ +E +A  +++   +++I++   Q +E+ 
Sbjct: 544 VSIADRAGERLGEVTQRIGEIDGMNQSVATATEEQTAVIESLNMDITEINTLNQQGVENL 603

Query: 600 NTQLR 604
            + LR
Sbjct: 604 QSTLR 608