Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 584 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  172 bits (435), Expect = 5e-47
 Identities = 114/346 (32%), Positives = 187/346 (54%), Gaps = 4/346 (1%)

Query: 275 ILVACVILAVLTVLLFMMVSFSLSKALTQIGRVLEKLSSGD--LSQRLALISNKKDEFNQ 332
           +LV+   L VL  LL + +S +L   L  I R L+ ++ GD  L+QRL + S  +DE  +
Sbjct: 233 MLVSAFALLVLMALLAIFMSNALLSPLLLIKRNLDDMAQGDGDLTQRLPITS--QDELGE 290

Query: 333 LAFAVNKSCENLGGLVHVVQDRSVALSGDAVALNQAIDNLVRGQSDVMDQTQRLASATEE 392
           LA + N+  E +  LV  V   +  LSG   A+        +  +D   +T ++A+A  E
Sbjct: 291 LAMSFNRFVEKIHSLVQQVAGTTTQLSGLVGAVASQAQRSEQAMADQRSETDQVATAINE 350

Query: 393 VSLTTQQVSHSLEVVANVSKASTLAAAEGSKVISAAIGSLREVGSILQSAASHIQQLEQA 452
           +S    +V+ S +  A  ++ +        +V+  +I  + E+   L+ +   ++ L+Q 
Sbjct: 351 MSAAAHEVAMSAQRAAEAARETDQQGVAAKQVVDQSIRQIHELVGELRGSGESLEGLQQD 410

Query: 453 SAKVDSVMDIINGIAEQTNLLALNAAIEAACAGEQGRGFAVVADEVRSLAVRTVNAVSEI 512
              +  V+D+I  IAEQTNLLALNAAIEAA AGE GRGFAVVADEVR+LA RT  +  EI
Sbjct: 411 VKGIVGVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASRTQQSTGEI 470

Query: 513 SGTIETMKKESAEVILFMNQSEQTMEEGQSKGNQAMQALQRITQGTDEAASQTERIFSSI 572
            G I+ ++  ++  +  M ++ +  E  + + NQA ++L  I+       S   +I ++ 
Sbjct: 471 QGMIDRLQSATSNTVSTMLRAGEKGESTRDQANQAGESLDAISALIGTINSMNAQIAAAA 530

Query: 573 KELSATSQAMAESMSQISSAMQALESYNTQLRVTSREVETRAESLE 618
           +E +A ++ +  S+  I+ A+  + S   Q   TSRE+   AE L+
Sbjct: 531 EEQTAVAEEINRSVHHIADAVDGVASDAAQGAQTSRELNGLAERLQ 576