Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 561 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  166 bits (420), Expect = 3e-45
 Identities = 116/404 (28%), Positives = 208/404 (51%), Gaps = 26/404 (6%)

Query: 225 SQQVKDIEKNLLSSEATAQGVIESTAQRLEEVSSRYQSLAEKAGEQTLLSILVACVILAV 284
           S  + D+E++++ + A  Q  I+S                        L +L + ++L +
Sbjct: 182 SLNLDDVERDVVEARAVFQARIDSLT----------------------LIMLGSALLLLI 219

Query: 285 LTVLLFMMVSFSLSKALTQIGRVLEKLSSGD--LSQRLALISNKKDEFNQLAFAVNKSCE 342
           L   L +++S ++ + L QI + L+ ++ GD  L+ RL + S  +DE  +L+ + N+  E
Sbjct: 220 LMAGLAVLMSNAILRPLLQIKQNLDDMAQGDGDLTHRLPITS--RDELGELSTSFNRFVE 277

Query: 343 NLGGLVHVVQDRSVALSGDAVALNQAIDNLVRGQSDVMDQTQRLASATEEVSLTTQQVSH 402
            +  LV  V   +  LSG   A+        +  +D   +T ++A+A  E+S    +V+ 
Sbjct: 278 KIHALVRQVAGTTTQLSGLVGAVASQAQRSEQAMADQRSETDQVATAINEMSAAAHEVAM 337

Query: 403 SLEVVANVSKASTLAAAEGSKVISAAIGSLREVGSILQSAASHIQQLEQASAKVDSVMDI 462
           S +  A  ++ +        +V+  +I  + E+   L+ +   ++ L+Q    +  V+D+
Sbjct: 338 SAQRAAEAARETDQQGVAAKQVVDQSIRQIHELVGELRGSGESLEGLQQDVKGIVGVLDV 397

Query: 463 INGIAEQTNLLALNAAIEAACAGEQGRGFAVVADEVRSLAVRTVNAVSEISGTIETMKKE 522
           I  IAEQTNLLALNAAIEAA AGE GRGFAVVADEVR+LA RT  +  EI G I+ ++  
Sbjct: 398 IRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASRTQQSTGEIQGMIDRLQNA 457

Query: 523 SAEVILFMNQSEQTMEEGQSKGNQAMQALQRITQGTDEAASQTERIFSSIKELSATSQAM 582
           ++  +  M ++ +  E  ++  NQA ++L  I+       S   +I ++ +E +A ++ +
Sbjct: 458 TSHTVGTMLRAGEKGESTRNHANQAGESLDAISALIGTINSMNAQIAAAAEEQTAVAEEI 517

Query: 583 AESMSQISSAMQALESYNTQLRVTSREVETRAESLEHDCRRFTL 626
             S+  I+ A+  + S   Q   T+RE+   AE L+    +F +
Sbjct: 518 NRSVHHIADAVDGVASDAAQGAQTARELNGLAEQLQRLVGQFRI 561