Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  159 bits (402), Expect = 4e-43
 Identities = 112/415 (26%), Positives = 207/415 (49%), Gaps = 18/415 (4%)

Query: 197 MSQSYAMLDLYKAEIEQFKTTFLRVSELSQQVKDIEKNLLSSEATAQGVIESTAQRLEEV 256
           ++Q  + L  Y++ ++ FK T       +Q    + K+L     T QG   +T  +L E 
Sbjct: 227 IAQFESALRNYRSSVDVFKAT-------TQTAASVRKDL-----TTQG---ATIVKLGEE 271

Query: 257 SSRYQSLAEKAGEQTLLSILVACVILAVLT-VLLFMMVSFSLSKALTQIGRVLEKLSSGD 315
               Q    K       S+ + CV+L +L  +L  ++++  +++ L     ++E+++SGD
Sbjct: 272 LYGLQMQMGKEDTAHARSLQIGCVVLVMLLGILAAVIITRQITRPLRDTLAIVERIASGD 331

Query: 316 LSQRLALISNKKDEFNQLAFAVNKSCENLGGLVHVVQDRSVALSGDAVALNQAIDNLVRG 375
           L+   A+   ++DE   L   + +    L  L+  ++D    ++  A  L+   +    G
Sbjct: 332 LTHTEAV--TRRDELGVLQQGIQRMGTTLRELISGIRDGVTQIASAAEELSAVTEQTSAG 389

Query: 376 QSDVMDQTQRLASATEEVSLTTQQVSHSLEVVANVSKASTLAAAEGSKVISAAIGSLREV 435
            +    +T ++A+A  E+S T  +V+ + E  +  +  +   A +G KV+  AI  +  +
Sbjct: 390 VNSQKVETDQVATAMHEMSATVHEVARNAEQASVAASDADQQARDGDKVVGEAIQQIERL 449

Query: 436 GSILQSAASHIQQLEQASAKVDSVMDIINGIAEQTNLLALNAAIEAACAGEQGRGFAVVA 495
            + +  ++  +  LEQ S K+  VMD+I  +AEQTNLLALNAAIEAA AGE GRGFAVVA
Sbjct: 450 AAEVVRSSDAMNVLEQDSDKIGKVMDVIKAVAEQTNLLALNAAIEAARAGEAGRGFAVVA 509

Query: 496 DEVRSLAVRTVNAVSEISGTIETMKKESAEVILFMNQSEQTMEEGQSKGNQAMQALQRIT 555
           DEVR LA RT  +  EI G +  ++  + +V   M  S    +       +A  +L+ IT
Sbjct: 510 DEVRGLAQRTQQSTEEIEGLVAALQNGTRQVSGIMLGSRTLTDSSVELTRRAGTSLESIT 569

Query: 556 QGTDEAASQTERIFSSIKELSATSQAMAESMSQISSAMQALESYNTQLRVTSREV 610
           +      +  ++I ++ ++ S+ +  ++ S+  +    +     + +   +S E+
Sbjct: 570 RTVSSIQAMNQQIAAAAEQQSSVADEISRSIVNVRDVSEQTAEASEETAASSVEL 624