Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 619 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  158 bits (399), Expect = 8e-43
 Identities = 108/384 (28%), Positives = 200/384 (52%), Gaps = 11/384 (2%)

Query: 244 GVIESTAQRLEE--VSSRYQSLAEKAGEQTLLSI-LVACVILAVLTVLLFMMVSFSLSKA 300
           G++   A +L E  V+ R + +++    + LLS+ L+A +I++ L      +++  +   
Sbjct: 242 GILFECADKLSENQVNLRVEDVSQA---KMLLSVWLIAALIMSALAA---WVITNLIVGP 295

Query: 301 LTQIGRVLEKLSSGDLSQRLALISNKKDEFNQLAFAVNKSCENLGGLVHVVQDRSVALSG 360
           L    ++ E+++ GDL+    +   +KDE  QL  ++ +   NL  L+  ++D    ++ 
Sbjct: 296 LRDTLKLAERVADGDLTHNQVV--TRKDELGQLQGSMMRMTGNLRELIGGLRDGVTQIAS 353

Query: 361 DAVALNQAIDNLVRGQSDVMDQTQRLASATEEVSLTTQQVSHSLEVVANVSKASTLAAAE 420
            A  L+   +    G +   ++T ++A+A  E+S T Q+V+ + E  ++ +  ++  A E
Sbjct: 354 AAEQLSAVTEQTSAGVNSQKNETDQVATAMHEMSATVQEVARNAEQASHAAVNASKEARE 413

Query: 421 GSKVISAAIGSLREVGSILQSAASHIQQLEQASAKVDSVMDIINGIAEQTNLLALNAAIE 480
           G  V+S A+  + ++ + +  + S +  L+  S K+  V+D+I  +AEQTNLLALNAAIE
Sbjct: 414 GDGVVSKAVAQIEKLATEVTHSKSAMDDLKNESNKIGGVLDVIKAVAEQTNLLALNAAIE 473

Query: 481 AACAGEQGRGFAVVADEVRSLAVRTVNAVSEISGTIETMKKESAEVILFMNQSEQTMEEG 540
           AA AGE GRGFAVVADEVRSLA RT  +  EI+  I  +   +A+V   ++ S+      
Sbjct: 474 AARAGEAGRGFAVVADEVRSLAQRTQTSTEEIAALISGLHTRTAQVATILDNSQALTANS 533

Query: 541 QSKGNQAMQALQRITQGTDEAASQTERIFSSIKELSATSQAMAESMSQISSAMQALESYN 600
                 A  ++  +TQ      +   +I ++ +E SA ++ +  S+  +    +   S +
Sbjct: 534 VELTRNAGVSINNMTQAISTIETMNHQIAAAAEEQSAVAEEINRSVLNVRDISEQTASAS 593

Query: 601 TQLRVTSREVETRAESLEHDCRRF 624
            +   +S E+      L+    RF
Sbjct: 594 EETAASSVELARLGVHLQSLVSRF 617