Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 646 a.a., Histidine kinase, HAMP region:Cache:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  154 bits (389), Expect = 1e-41
 Identities = 121/431 (28%), Positives = 209/431 (48%), Gaps = 29/431 (6%)

Query: 212 EQFKTTFLRVSELSQQVKDIEKNLLSSEATAQGVIESTAQRLEEVSSRYQSLA------- 264
           +Q +  F ++ EL     ++ K       TA G++E T      +++ Y S         
Sbjct: 225 KQPEHNFKKLGELGDGFSELAK-------TASGLVEVTLNGERYMANVYSSEQLGWNFIG 277

Query: 265 -----EKAGEQTLLSILVACVILAVLTVLLFMMVSFSLSKALTQ----IGRVLEKLSSG- 314
                E     T L+ L+   I+A +  ++F +V  S ++ + +    +   LE ++ G 
Sbjct: 278 LIKQDEVMASATRLTWLIG--IIAAVLAVVFAIVGASFARVIVRPIHSVSSGLEGIAGGE 335

Query: 315 -DLSQRLALISNKKDEFNQLAFAVNKSCENLGGLVHVVQDRSVALSGDAVALNQAIDNLV 373
            DL+Q LA+    KDE  QLA   NK    +  L+  +   +  +   + +  +  +++ 
Sbjct: 336 GDLTQNLAV--RGKDETAQLAGWFNKFLTAIRSLIQHIGQAAGKILEASHSSTRVSNDMA 393

Query: 374 RGQSDVMDQTQRLASATEEVSLTTQQVSHSLEVVANVSKASTLAAAEGSKVISAAIGSLR 433
                  +    +++A  E+  T+ +V+ S    A+ +      A EG + I  A+ S+ 
Sbjct: 394 EAAGRQREAVDMVSTAFHEMVATSNEVARSCSQAADSADNGQQQAREGQRQIDDAVRSVD 453

Query: 434 EVGSILQSAASHIQQLEQASAKVDSVMDIINGIAEQTNLLALNAAIEAACAGEQGRGFAV 493
           ++   L  +A  + QLE+ SA + S+++ I  IAEQTNLLALNAAIEAA AGEQGRGFAV
Sbjct: 454 QLSEELTRSAKDMTQLEKDSAGIQSILNTIRSIAEQTNLLALNAAIEAARAGEQGRGFAV 513

Query: 494 VADEVRSLAVRTVNAVSEISGTIETMKKESAEVILFMNQSEQTMEEGQSKGNQAMQALQR 553
           VADEVR+LA RT ++ +EI   +  + K +A V   M+ S    ++  +K  QA  +  +
Sbjct: 514 VADEVRALAKRTSDSTAEIDSLLGNLAKRTASVAQQMHASLDVSQQSVTKIGQARSSFGQ 573

Query: 554 ITQGTDEAASQTERIFSSIKELSATSQAMAESMSQISSAMQALESYNTQLRVTSREVETR 613
           I +  D       +I ++ +E    ++ +   +SQI    Q +   +   R  SR +E  
Sbjct: 574 IRESVDVIRDMNTQIATAAEEQHQVAEDINRHISQIHGDAQLIAQLSDSARADSRSLEML 633

Query: 614 AESLEHDCRRF 624
           +  L+   R+F
Sbjct: 634 SSELDGLVRKF 644