Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., Histidine kinase, HAMP region:Cache:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  155 bits (393), Expect = 4e-42
 Identities = 94/323 (29%), Positives = 179/323 (55%), Gaps = 4/323 (1%)

Query: 274 SILVACVILAVLTVLLFMMVSFSLSKALTQIGRVLEKLSSG--DLSQRLALISNKKDEFN 331
           S +VA +I   +  LL  ++  +L + LT +GR ++ ++ G  DL++RL++    KDEF 
Sbjct: 274 SAMVAVLIAVAVIALLLSLLIRALMRPLTDMGRAMQDIAQGEGDLTRRLSI--QGKDEFA 331

Query: 332 QLAFAVNKSCENLGGLVHVVQDRSVALSGDAVALNQAIDNLVRGQSDVMDQTQRLASATE 391
            L  + N+  E +   +  V   ++ +   +  +  + ++ + G  +   +T  +A+A  
Sbjct: 332 ALGGSFNQFVERVHASIVEVSSATLQVHDLSQRVVNSSNSSIVGFDEQSARTNNVAAAIN 391

Query: 392 EVSLTTQQVSHSLEVVANVSKASTLAAAEGSKVISAAIGSLREVGSILQSAASHIQQLEQ 451
           E+   TQ+++ +    +  +  +   A +G  V+   I ++  + + +  + + I+QL  
Sbjct: 392 ELGAATQEIARNASDASIQASEARNQAEDGQVVVEKTIHAMSALSAKISDSCTQIEQLNA 451

Query: 452 ASAKVDSVMDIINGIAEQTNLLALNAAIEAACAGEQGRGFAVVADEVRSLAVRTVNAVSE 511
           ++  +  ++D+I GI++QTNLLALNAAIEAA AGE GRGFAVVADEVR+LA RT  +  E
Sbjct: 452 STENIGHILDVIKGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQTSADE 511

Query: 512 ISGTIETMKKESAEVILFMNQSEQTMEEGQSKGNQAMQALQRITQGTDEAASQTERIFSS 571
           I   I +++  S   +L MN+S+ + +E     NQA   L+ +T+   +     + + ++
Sbjct: 512 IHKMIGSLQSGSQHAVLNMNESQTSSQESVEVANQAGSRLRDVTRRIGDIDGMNQSVAAA 571

Query: 572 IKELSATSQAMAESMSQISSAMQ 594
            +E +A  + +   ++QI++  Q
Sbjct: 572 TEEQTAVVETLNIDINQINTLNQ 594