Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 658 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  183 bits (464), Expect = 2e-50
 Identities = 120/357 (33%), Positives = 188/357 (52%), Gaps = 6/357 (1%)

Query: 268 GEQTLLSILVACVILAVLTVLLFMMVSFSLSKALTQIGRVLEKLSSGDLSQRLALISNKK 327
           G Q  +  L+A +I  +  + L      S  + L+++ R  + L +GDLS RL + SN  
Sbjct: 307 GTQLAIGSLLAMLIAVISAIWLLR----SKLRPLSELVRQADALGAGDLSVRLNVTSN-- 360

Query: 328 DEFNQLAFAVNKSCENLGGLVHVVQDRSVALSGDAVALNQAIDNLVRGQSDVMDQTQRLA 387
           DE  QL+ + NK  E L  +V  ++  +  +S  A  L+        G      +   +A
Sbjct: 361 DEIGQLSGSFNKMSEALSSMVSHIRTAAQEVSTRANVLSGLSGGAFEGMEQQSGEITSMA 420

Query: 388 SATEEVSLTTQQVSHSLEVVANVSKASTLAAAEGSKVISAAIGSLREVGSILQSAASHIQ 447
            A EE S T+  ++ ++     +++ +      G   +  A  SL+++ + L S A  I 
Sbjct: 421 GAVEEFSATSMNIADNMGNTERLAQENAQQTRIGRTSMEEASSSLQQIATSLSSTAKVID 480

Query: 448 QLEQASAKVDSVMDIINGIAEQTNLLALNAAIEAACAGEQGRGFAVVADEVRSLAVRTVN 507
            L Q S ++ S++ +I  IA+QTNLLALNAAIEAA AGEQGRGFAVVADEVRSLA RT  
Sbjct: 481 TLGQRSQEIGSIVGVITSIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTRE 540

Query: 508 AVSEISGTIETMKKESAEVILFMNQSEQTMEEGQSKGNQAMQALQRITQGTDEAASQTER 567
           A  EISG I ++++E+   I  M Q    M+EG S   +   AL +I + +  A  Q   
Sbjct: 541 ATDEISGMIASIQQETGNAISTMQQGNTLMQEGLSLNAKVASALAQIDEQSRSAGHQFAA 600

Query: 568 IFSSIKELSATSQAMAESMSQISSAMQALESYNTQLRVTSREVETRAESLEHDCRRF 624
           I ++ +E S+T+  ++ ++  I+ A        + L +T++E+   A  L H+  RF
Sbjct: 601 ITTATQEQSSTATMLSSNLQSIAMANSEQRQVMSNLAITAQELNGLATELRHEVDRF 657