Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 636 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  162 bits (411), Expect = 3e-44
 Identities = 101/356 (28%), Positives = 179/356 (50%)

Query: 269 EQTLLSILVACVILAVLTVLLFMMVSFSLSKALTQIGRVLEKLSSGDLSQRLALISNKKD 328
           ++  L IL + +++A+  V+L   V+ S+SK +  + R+   +  G+   R  L    +D
Sbjct: 279 DEAALKILFSTLLIALAFVVLSGFVASSVSKPIAAVARMFRDIGEGEGDLRQRLPVQGED 338

Query: 329 EFNQLAFAVNKSCENLGGLVHVVQDRSVALSGDAVALNQAIDNLVRGQSDVMDQTQRLAS 388
           E  QLA   N     +   V  V   S  L   A+ +++     +    D  D+T ++ +
Sbjct: 339 ELAQLASGFNSFISKIQDSVIEVAQTSEQLGKSAIDVSRQAQQTLEDSQDQKDRTMQVVT 398

Query: 389 ATEEVSLTTQQVSHSLEVVANVSKASTLAAAEGSKVISAAIGSLREVGSILQSAASHIQQ 448
           A  E+  T  +++ +    A  +K +  A+  G KV++ A  ++ ++   +      I+ 
Sbjct: 399 AINEMGATVNEIAANAAQAAEAAKDADRASGSGQKVVTQARDTINQLSKDVSQVGEVIES 458

Query: 449 LEQASAKVDSVMDIINGIAEQTNLLALNAAIEAACAGEQGRGFAVVADEVRSLAVRTVNA 508
           L   +  + S++D+I  I+EQTNLLALNAAIEAA AGE GRGFAVVADEVR+LA RT  +
Sbjct: 459 LATHTKSIGSILDVIRAISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLASRTAAS 518

Query: 509 VSEISGTIETMKKESAEVILFMNQSEQTMEEGQSKGNQAMQALQRITQGTDEAASQTERI 568
             E+   I+ ++ ESA  +  M+QS    +EG S  ++A   L  I+      +    ++
Sbjct: 519 TDEVQVMIDKLQSESARAVNAMSQSRSRSQEGVSAVDEASNTLSGISDQIGLISDMNIQV 578

Query: 569 FSSIKELSATSQAMAESMSQISSAMQALESYNTQLRVTSREVETRAESLEHDCRRF 624
            ++ +E S   + +  ++++I+   Q   +        S+++   A  L+    RF
Sbjct: 579 AAATEEQSTVVEDINRNVTEINDITQRTAATAQAAARASKDLNALATRLDQLVARF 634