Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 558 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  163 bits (413), Expect = 2e-44
 Identities = 103/362 (28%), Positives = 191/362 (52%), Gaps = 4/362 (1%)

Query: 260 YQSLAEKAGEQTLLSILVACVILAVLTVLLFMMVSFSLSKALTQIGRVLEKLSSG--DLS 317
           Y   A +A  +  ++I +  ++LA +T++     +  + K +  +   L  ++ G  DL+
Sbjct: 192 YSQSARQAMWEKAVAIFMMSLVLAFITLIAIWSAAHRMVKPIRAMVDSLNDIAKGEGDLT 251

Query: 318 QRLALISNKKDEFNQLAFAVNKSCENLGGLVHVVQDRSVALSGDAVALNQAIDNLVRGQS 377
            RL++    +DE  +L  A N+  + L G++  V D +  +   AV +++    +    +
Sbjct: 252 ARLSV--RGEDEIAELGIAFNQFVDKLQGIIRDVADTTGRVKQAAVDIDRQTSEMANQLN 309

Query: 378 DVMDQTQRLASATEEVSLTTQQVSHSLEVVANVSKASTLAAAEGSKVISAAIGSLREVGS 437
              ++T ++ +A  E+S T  +V+ +   VA  ++A+T   A+    +  ++  +  + S
Sbjct: 310 SHNNETDQVVTAITEMSSTAAEVAQNTTQVAEATQAATGDVAKAQACVDTSLAEISNLMS 369

Query: 438 ILQSAASHIQQLEQASAKVDSVMDIINGIAEQTNLLALNAAIEAACAGEQGRGFAVVADE 497
            +  AA++IQ L + S K++SV+ +I GIAEQTNLLALNAAIEAA AGEQGRGFAVVADE
Sbjct: 370 QVNDAAANIQSLSEQSQKINSVLSVIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADE 429

Query: 498 VRSLAVRTVNAVSEISGTIETMKKESAEVILFMNQSEQTMEEGQSKGNQAMQALQRITQG 557
           VR+LA RT  +  EI+  +  + +  +  +  M++S+ + +          ++L  +T  
Sbjct: 430 VRNLASRTQASTLEINEMLTDLHRLVSSAVKTMDESQHSCQRSVEASTAISESLGSVTSA 489

Query: 558 TDEAASQTERIFSSIKELSATSQAMAESMSQISSAMQALESYNTQLRVTSREVETRAESL 617
                  + +I ++  E S+ ++ +  ++  I   + AL   + + R  SR V T    L
Sbjct: 490 VTAINDMSTQIAAAATEQSSVTEEINRNVYAIQEIVNALLVSSQEARTVSRTVSTEGAQL 549

Query: 618 EH 619
            +
Sbjct: 550 SN 551