Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 673 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  177 bits (448), Expect = 2e-48
 Identities = 161/584 (27%), Positives = 266/584 (45%), Gaps = 39/584 (6%)

Query: 58  QAQLFELAAEREHLSSNKVSEIKTRLAQLMQKVEGDK-RFLAENNFANEGNALQQAVQAF 116
           Q QL  L++  + L SN  + +K R   L Q+ E  K R   EN+  +  + L   +   
Sbjct: 110 QGQLSGLSSSYQVLESNSKAMLKARFDSLSQQEELLKLREKLENSADDASSNLFDLIDLE 169

Query: 117 NDDMQPWLEIKGELGF----------NVDDGKLAELKKLAVTIEKKID------ETGMVT 160
           +   Q   EI    G            V D   AE +     I K++D      +T M  
Sbjct: 170 SSQNQTEREIAAAAGAIDTTMTGIITTVYDLVAAEERSKYELISKELDYMLGEVKTKMEY 229

Query: 161 INSDFQAMIKAQQNYLLQPNEQNLRLFNRALAGFVSMSQSYAMLDLYKAEIEQFKTTFLR 220
           I+   + +I A     L  N+ + ++          +     ++ L   +I+  + T   
Sbjct: 230 ISRHGEGIIDADLVSTL--NDDSTKVLKM-------LEGKDTLVTLKSRQIDSTQLT--- 277

Query: 221 VSELSQQVKDIEKNLLSSEATAQGVIESTAQRLEEVSSRYQSLAEKAGEQTLLSILVACV 280
               S+++  +EKN L    T    ++  A+ +E V++   + A        L  L+  V
Sbjct: 278 ----SEKLTLVEKNAL----TVTEQMKRLAKDIETVTNDISNQALNDINSASLRTLILVV 329

Query: 281 ILAVLTVLLFMMVSFSLSKALTQIGRVLEKLSSGDLSQRLALISNKKDEFNQLAFAVNKS 340
           I  V+ V++   V   L ++L ++   L  L+SGDL+ +L       DEF +L+   N+ 
Sbjct: 330 IAIVVAVVISFAVVRPLKRSLDEVNGALNVLASGDLTHKLD--DTGHDEFAELSRNCNRL 387

Query: 341 CENLGGLVHVVQDRSVALSGDAVALNQAIDNLVRGQSDVMDQTQRLASATEEVSLTTQQV 400
            ++L  L+  + DRS  L+  A   +        G  +   Q  ++A+AT E+S +  QV
Sbjct: 388 VDSLRSLIASILDRSNQLAAAAEETSAITSQTTIGIQEQKSQVDQVATATTELSSSAHQV 447

Query: 401 SHSLEVVANVSKASTLAAAEGSKVISAAIGSLREVGSILQSAASHIQQLEQASAKVDSVM 460
           + S +   +  K +         +      ++  +   +  A+  I ++   SA + S++
Sbjct: 448 NMSADDALSQIKQADEETQHMRTIADENKRTILSLADEVAKASKVINKVHSDSASIGSIL 507

Query: 461 DIINGIAEQTNLLALNAAIEAACAGEQGRGFAVVADEVRSLAVRTVNAVSEISGTIETMK 520
           D+I GIAEQTNLLALNAAIEAA AGEQGRGFAVVADEVRSLA RT ++  EI   IE ++
Sbjct: 508 DVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQDSTREIQQMIEVLQ 567

Query: 521 KESAEVILFMNQSEQTMEEGQSKGNQAMQALQRITQGTDEAASQTERIFSSIKELSATSQ 580
           + + + +  M   +   +    K  QA QALQ I+    +A      I  + +E +  SQ
Sbjct: 568 QGTQQAVAVMQLGQNQAQSCVEKTEQANQALQTISHSVHKAYDAGTHIAQAAQEQNLVSQ 627

Query: 581 AMAESMSQISSAMQALESYNTQLRVTSREVETRAESLEHDCRRF 624
            ++E +  I++  +       Q   +S EV   AE L+   + F
Sbjct: 628 QVSEKLEHIAAISEETALGAEQTAKSSHEVARLAEELQSSVKEF 671