Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 621 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  171 bits (432), Expect = 1e-46
 Identities = 140/575 (24%), Positives = 266/575 (46%), Gaps = 20/575 (3%)

Query: 55  FATQAQLFELAAEREHLSSNKVSEIKTRLAQLMQKVEG-DKRFLAENNFANEGNALQQAV 113
           F T++ +  +    +H      +E+KT+L+ + Q  E  D      + F +    L Q +
Sbjct: 59  FLTRSDMAYVQGHAQH-----AAELKTKLSTVKQVFEKYDMPMAPLDRFES---LLGQYL 110

Query: 114 QAFNDDMQPWLEIKGELGFNVDDGKLAELKKLAVTIEKKIDETGMVTINSDFQAMIKAQQ 173
             F+D +     ++ ++G     G   +L++    +E  + E     +      + + ++
Sbjct: 111 TLFSDVVT----LQQQIGLTPKSGLYGQLREAVHNVETLLKEHNKPELAVQMLQLRRNEK 166

Query: 174 NYLLQPNEQNLRLFNRALAGFVSMSQSYAMLDLYKAEIEQFKTTF-LRVSELSQQVKDIE 232
           +++L+ +   L  F + L  F S      +      EI +    + +    L  + K+  
Sbjct: 167 DFMLRRDAGYLDKFQQTLRSFDSTLDGSDLSPDVADEIRRLMKDYQMNFEALVNKEKEFG 226

Query: 233 KNLLSSEATAQGVIESTAQRLEEVSSRYQSLA-EKAGEQTLLSILVACVILAVLTVLLFM 291
              L  E    G + S   + E+ +   + LA  +  ++   S+ +A  + AV+ VL+ +
Sbjct: 227 ---LGKEDGKMGALRSVIDQSEQATQELRELALHEIHDEEGDSVAMATTLFAVIAVLVAI 283

Query: 292 MVSFSLSKALTQIGRVLEKLSSGDLSQRLALISNKK--DEFNQLAFAVNKSCENLGGLVH 349
           +    +   +T I  + + +S     + L L  + +  DE  ++    N+  E+   L+ 
Sbjct: 284 VTFMIIRAIITPINNINQVISHVGKDKNLTLRCDTQGGDEIAEIGQHFNEMVESFRALIQ 343

Query: 350 VVQDRSVALSGDAVALNQAIDNLVRGQSDVMDQTQRLASATEEVSLTTQQVSHSLEVVAN 409
            V D    ++     L+        G    +++T  +A+A  E+  T  +++ + E+ A 
Sbjct: 344 QVNDAVNVMNESCQELSANATQASDGVLRQLNETDMVATAITEMGATIDEIAKNTELAAE 403

Query: 410 VSKASTLAAAEGSKVISAAIGSLREVGSILQSAASHIQQLEQASAKVDSVMDIINGIAEQ 469
            +  +   A  G + +   I  ++ +   L ++AS + +LE+ S  + SV+D+I GIAEQ
Sbjct: 404 RANHTHTNAQVGQQSVEQTIEKIQSLAQQLNNSASVVAELERDSGTIGSVLDVIRGIAEQ 463

Query: 470 TNLLALNAAIEAACAGEQGRGFAVVADEVRSLAVRTVNAVSEISGTIETMKKESAEVILF 529
           TNLLALNAAIEAA AGEQGRGFAVVADEVRSLA+RT  +  EI+G I+T++  +  ++  
Sbjct: 464 TNLLALNAAIEAARAGEQGRGFAVVADEVRSLAMRTQESTEEIAGIIQTLQSRTRSIVQL 523

Query: 530 MNQSEQTMEEGQSKGNQAMQALQRITQGTDEAASQTERIFSSIKELSATSQAMAESMSQI 589
           M  S++   E   +   A   L +I Q        + +I ++I+E S+ +  + +++  I
Sbjct: 524 MEASQRQGGESAEQAASAGTMLAQINQDVTNIMDMSTQIAAAIEEQSSVAAEVNKNVVVI 583

Query: 590 SSAMQALESYNTQLRVTSREVETRAESLEHDCRRF 624
               +            S +V  RAE L+    +F
Sbjct: 584 RDIAEESSHAAMANAKASDDVRERAEYLQRAVSQF 618