Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 504 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  145 bits (365), Expect = 5e-39
 Identities = 109/370 (29%), Positives = 189/370 (51%), Gaps = 26/370 (7%)

Query: 261 QSLAEKAGEQTLLSILVACVILAVLTVLLFMMVSFSLSKALTQIGRVLEKLSSGDLSQRL 320
           +++A ++G  T   +    ++L ++ +  + + +F +  AL      L++ + GDL+ RL
Sbjct: 141 KAVALESGNDTWFVMGAIALVLFIIFIFSYYISTF-VGGALYTTVMALKRAADGDLTGRL 199

Query: 321 ALISNKKDEFNQLAFAVNKSCENLGGLVHVVQD------------RSVALSGDAVALNQA 368
                 KDEF+ LA +++   E    LV  + D            R+ A  G A+A +Q 
Sbjct: 200 NFFQ-VKDEFSILAISIDSLVERQHNLVKSINDATRQIRTVVESFRTNARDGQALAASQ- 257

Query: 369 IDNLVRGQSDVMDQTQRLASATEEVSLTTQQVSHSLEVVANVSKASTLAAAEGSKVISAA 428
                R   D       LA+A E+++   ++V+ + E  +  ++ +    A GSK I+  
Sbjct: 258 -----RAHLD------SLATAMEQMTAAVREVASNAEHSSQETQEANQQVAAGSKDIATT 306

Query: 429 IGSLREVGSILQSAASHIQQLEQASAKVDSVMDIINGIAEQTNLLALNAAIEAACAGEQG 488
           + ++ ++ + +  A+  +  L + ++++D V+  IN I+EQTNLLALNAAIEAA AGEQG
Sbjct: 307 VSAIGQLSNEIARASDAVTVLNENASRIDEVVTTINAISEQTNLLALNAAIEAARAGEQG 366

Query: 489 RGFAVVADEVRSLAVRTVNAVSEISGTIETMKKESAEVILFMNQSEQTMEEGQSKGNQAM 548
           RGFAVVADEVR+LA RT  A  EI   IE ++  S  +   M ++ +  EEG+    +  
Sbjct: 367 RGFAVVADEVRTLAGRTQAATVEIKSMIEALQSGSRNLTQVMARTVEQAEEGKKHVIKTG 426

Query: 549 QALQRITQGTDEAASQTERIFSSIKELSATSQAMAESMSQISSAMQALESYNTQLRVTSR 608
           + L  I   + +    +  I +S +E SA +  +A ++ +I +    +E    Q      
Sbjct: 427 EDLDSIAHHSAKVFEMSVLIATSAEEQSAVANEIAGNLMEIRNQSHDVEQSANQSVSGCD 486

Query: 609 EVETRAESLE 618
           E+   AE L+
Sbjct: 487 ELHATAEKLD 496