Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 661 a.a., methyl-accepting chemotaxis protein from Pseudomonas fluorescens SBW25-INTG

 Score =  161 bits (407), Expect = 1e-43
 Identities = 134/489 (27%), Positives = 233/489 (47%), Gaps = 24/489 (4%)

Query: 138 KLAELKKLAVTIEKKIDETGMVTINSDFQAMIKAQ--QNYLLQPNEQNLRLFNRALAGFV 195
           ++A  +KL + + K  D     T+      + +    Q+ ++    Q L   +  +    
Sbjct: 175 QVAAAEKLLLEVNKSYDGFAAHTVTPAIDKLQRVLNLQDEVISTRAQALTAIDPRVGRIA 234

Query: 196 SMSQSYAMLDLYKAE--IEQFKTTFLRVSELSQQVKDIEKNLLSSEATAQGVIESTAQRL 253
            +  +  + DL  A+   + ++      +++ QQ   +E  L   +AT   + E  +Q L
Sbjct: 235 GVMVNRLLTDLTAADGLFQAYQVEAKLAAQVQQQRNAVEAAL---KATLDRIGEFGSQSL 291

Query: 254 EEVSSRYQSLAEKAGEQTLLSILVACVILAVLTVLLFMMVSFSLSKALTQIGRVLEKLSS 313
           E  +   QS     G    L +L+ACV+  +  VL+   V+FSL + L     VL+ L++
Sbjct: 292 EVANQASQSANATIGTSRSL-LLIACVLAVLAAVLIGTWVAFSLRRPLAAFREVLKTLTA 350

Query: 314 GDLSQRLALISNKKDEF-------NQLAFAVNKSCENLGGLVHVVQDRSVALSGDAVALN 366
           GD+  R++   ++KDEF       N+L  A+ K+   L G        ++A++  + ALN
Sbjct: 351 GDM--RVSFDVSRKDEFGELGGYLNELTAALRKTFRELIGSAD-----ALAVTAGSNALN 403

Query: 367 QAIDNLVRGQSDVMDQTQRLASATEEVSLTTQQVSHSLEVVANVSKASTLAAAEGSKVIS 426
              +   R   +  D+ Q  ASA  ++  T ++V+   +        ++    +    ++
Sbjct: 404 S--EQTTRVVDEQKDRLQSAASAMTQMESTVEEVARRAQDTRQAVDDTSELTHKVQARVA 461

Query: 427 AAIGSLREVGSILQSAASHIQQLEQASAKVDSVMDIINGIAEQTNLLALNAAIEAACAGE 486
             I ++R+    +  A     +L++    ++ ++  I  IAEQTNLLALNAAIEAA AGE
Sbjct: 462 ETIVNIRQQADQVNKATQVTDELQKYGQNIEGIVVAIRTIAEQTNLLALNAAIEAARAGE 521

Query: 487 QGRGFAVVADEVRSLAVRTVNAVSEISGTIETMKKESAEVILFMNQSEQTMEEGQSKGNQ 546
           QGRGFAVVADEVRSLA RT  + SEI   I  M+++   V+  MN+S+    +  S  + 
Sbjct: 522 QGRGFAVVADEVRSLASRTQTSTSEIQDMIGLMQEKIHSVVHVMNESQAQSTQCVSLASG 581

Query: 547 AMQALQRITQGTDEAASQTERIFSSIKELSATSQAMAESMSQISSAMQALESYNTQLRVT 606
           A   L  ++   D       +I ++ +E SAT Q  +  + QI+ + Q       Q  ++
Sbjct: 582 AGDLLLSMSDSVDSIRDMNIQIAAATEEQSATVQETSRMVIQINDSAQQTAQGAEQSAIS 641

Query: 607 SREVETRAE 615
           S E+   A+
Sbjct: 642 SHELSDMAK 650