Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  166 bits (421), Expect = 2e-45
 Identities = 110/359 (30%), Positives = 191/359 (53%), Gaps = 3/359 (0%)

Query: 269 EQTLLSILVACVILAVLTVLLFMMVSFSLSKALTQIGRVLEKLSSGDLSQRLALISNKKD 328
           E ++   ++  ++ A+ +++L + ++ S+ K +  I   L  +   D    +      KD
Sbjct: 185 ESSISLFILITLVAAIASIVLGVWINRSVMKPINHIRTQLHTIQQ-DSDLTVTFEQLNKD 243

Query: 329 EFNQLAFAVNKSCENLGGLVHVVQDRSVALSGDAVALNQAIDNLVRGQSDVMDQTQRLAS 388
           E   ++  +N    +L G++  V + + ++S  A+ALN+              +T++ A+
Sbjct: 244 ELGLISTGLNDVFRHLRGILKGVAEAANSVSDSALALNEFTQISNARIQQQQAETEQTAT 303

Query: 389 ATEEVSLTTQQVSHSLEVVANVSKASTLAAAEGSKVISAAIGSLREVGSILQSAASHIQQ 448
           A  E++ T  +V+ S    A+ ++ +   AA G+ ++  +I S++ +   +QS +  I  
Sbjct: 304 AMNEMTATVNEVAQSTTAAADSARNADRFAANGNDIVQLSISSMQALSMQIQSTSEVITH 363

Query: 449 LEQASAKVDSVMDIINGIAEQTNLLALNAAIEAACAGEQGRGFAVVADEVRSLAVRTVNA 508
           L   S  + SV+ +I GIAEQTNLLALNAAIEAA AGEQGRGFAVVADEVRSLA RT  A
Sbjct: 364 LSHESQHIGSVLSVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQEA 423

Query: 509 VSEISGTIETMKKESAEVILFMNQSEQTMEEGQSKGNQAMQALQRITQGTDEAASQTERI 568
             EI   IET++    E +  M+   + +++   + N+A +ALQ I    D        I
Sbjct: 424 TQEIETMIETLQSGVNEAVTAMDVGIKQVDDANQQTNKAGEALQEIVASVDNITEMNTHI 483

Query: 569 FSSIKELSATSQAMAESMSQISS-AMQALESYNTQLRVTSREVETRAESLEHDCRRFTL 626
            ++ +E S+ ++++  S+  IS  A Q+ ES   +L  +  ++ + A+S+      F L
Sbjct: 484 ATAAEEQSSVAESINRSIIAISDIASQSTES-ALELGHSIAQLTSLADSMRQQVTTFRL 541