Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 548 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  152 bits (385), Expect = 3e-41
 Identities = 110/390 (28%), Positives = 198/390 (50%), Gaps = 16/390 (4%)

Query: 241 TAQGVIESTAQRLEEVSSRYQSLAEKAGEQTLLSILVACVILAVLTVLLFMMVSFSLSKA 300
           T  G I  T   ++++    Q+   K         L+ C+ + +  +L+  ++S S+S  
Sbjct: 171 TPWGWIVGTGIYVDDIQEEMQAFIYK--------YLLICIAVWLPVILILGVISRSISAP 222

Query: 301 LTQIGRVLEKLSSGDLSQRLALISNKKDEFNQLAFAVNKSCENLGGLVHVVQDRSVALSG 360
           +       E ++ G+    L L  + +DE  Q+A + N+    +  LV+ V         
Sbjct: 223 MADTIAAFENIARGEGDLTLRLEESGRDELKQVAASFNEFVAKIQALVNSVSASVTHSRE 282

Query: 361 DAVALNQAIDNLVRGQSDVMDQTQRLASATEEVSLTTQQVSHSLEVVANVSKASTLAAAE 420
            A  L           +++  +TQ +A+A  E+S+ + +V+ + ++ A+ + ++   A +
Sbjct: 283 LAEGLADISAQASMVTANMQAETQSVATAINEMSMASSEVASNAQLAADSAGSADGEADD 342

Query: 421 GSKVISAAIGSLREVGSILQSAASHIQQLEQASAKVDSVMDIINGIAEQTNLLALNAAIE 480
              V+  A+  ++ + + L+  A   Q L+ +S K+  ++D+I GIAEQTNLLALNAAIE
Sbjct: 343 TVAVVDGAVAKIKGLSNELEVTADEAQALQISSGKIGQILDVIVGIAEQTNLLALNAAIE 402

Query: 481 AACAGEQGRGFAVVADEVRSLAVRTVNAVSEISGTIETMKKE----SAEVILFMNQSEQT 536
           AA AGE GRGFAVVADEVR+LA RT  +  EI+  IE ++      +A V     QSEQT
Sbjct: 403 AARAGEAGRGFAVVADEVRTLASRTQESTQEINAIIEAIRASVDSVNASVARAKAQSEQT 462

Query: 537 MEEGQSKGNQAMQALQRITQGTDEAASQTERIFSSIKELSATSQAMAESMSQISSAMQAL 596
           + E     +Q ++ALQ I     + +    +I ++ +E SA    +  ++++I+      
Sbjct: 463 VGE----TSQVVEALQTIKSSIRQISDMNIQIATATEEQSAVIAELNMNVTRINDISLEN 518

Query: 597 ESYNTQLRVTSREVETRAESLEHDCRRFTL 626
           +  + ++  TS ++++ +  LE     F L
Sbjct: 519 QQKSEEIGSTSEQIKSGSADLESLISTFKL 548