Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  159 bits (403), Expect = 3e-43
 Identities = 106/344 (30%), Positives = 179/344 (52%), Gaps = 18/344 (5%)

Query: 269 EQTLLSILVACVILAVLTVLLFMMVSFSLSKALTQIGRVLEKLSSG--DLSQRLALISNK 326
           E++   ILV  V++A   + L   VS S+S+ + ++  +L+ +  G  DL QRL +  N 
Sbjct: 281 EESAYQILVWTVLIAAAFIGLSTFVSASVSQPIAKVADMLQDIGQGEGDLRQRLPVEGN- 339

Query: 327 KDEFNQLAFAVNKSCENLGGLVHVVQDRSVALSGDAVALNQAIDNLVRGQSDVMDQTQRL 386
            DE  QLA   N   E +   +  V D SV LS  A  +               DQT  +
Sbjct: 340 -DELAQLAKGFNSFIEKIQHSIIEVTDTSVQLSHAAKDVANQAQQTQDDSQLQKDQTMMV 398

Query: 387 ASATEEVSLTTQQVSHSLEVVANVSKASTLAAAEGSKVISAAIGSLREVGSILQSAASHI 446
            +A  E+  T  +++ +    A+ +K +  A++ G  V++ A  ++ ++   ++   + I
Sbjct: 399 VTAINEMGATVHEIAGNAAQAADNAKDADNASSNGQIVVTRARDTINQLSQDVEQVGNVI 458

Query: 447 QQLEQASAKVDSVMDIINGIAEQTNLLALNAAIEAACAGEQGRGFAVVADEVRSLAVRTV 506
           + L   +  + S++D+I  +++QTNLLALNAAIEAA AGE GRGFAVVA+EVR+LA RT 
Sbjct: 459 ESLATHTTSIGSILDVIRAVSDQTNLLALNAAIEAARAGEAGRGFAVVAEEVRNLASRTA 518

Query: 507 NAVSEISGTIETMKKESAEVILFMNQSEQTMEEGQSKGNQAMQALQRITQ---------- 556
            +  E+   I+ ++ E+A  +  M QS+   +EG    ++A   L  I+Q          
Sbjct: 519 ASTDEVQKMIDNLQSEAARAVEAMTQSKSRSQEGVQAVDEASHTLTEISQQIGAITDMNI 578

Query: 557 ----GTDEAASQTERIFSSIKELSATSQAMAESMSQISSAMQAL 596
                T+E ++  E I  ++ E+S  +Q  +E+   ++ A Q+L
Sbjct: 579 QVAAATEEQSTVVEDINRNVTEISEITQRTSETSQAVAQASQSL 622