Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 564 a.a., methyl-accepting chemotaxis sensory transducer from Marinobacter adhaerens HP15

 Score =  150 bits (380), Expect = 1e-40
 Identities = 110/391 (28%), Positives = 189/391 (48%), Gaps = 17/391 (4%)

Query: 244 GVIESTAQRLEEVSSRYQSLAEKAG---EQTLLSILVACVILAVLTVLLFMMVSFSLSKA 300
           GV+  T   ++ + ++  ++  + G   E  ++  +   ++   L VLL ++V  S+ + 
Sbjct: 179 GVMIGTGFWIDGLEAQVAAMESQVGTSLEDAVIGSVSTSLVALALIVLLALIVVRSIIRP 238

Query: 301 LTQIGRVLEKLSSGDLSQRLALISNKKDEFNQLAFAVNKSCENLGGLVHVVQDRSVALSG 360
           L      +  ++SGD      L  + KDE  QLA A N   + + GLV  V   +  L+ 
Sbjct: 239 LKSAVSAMNDIASGDGDLTRRLDVSGKDELGQLATAFNSFADQVHGLVERVLSSTRTLNE 298

Query: 361 DAVALNQAIDNLVRGQSDVMDQTQRLASATEEVSLTTQQVSHSLEVVANVSKASTLAAAE 420
               LNQ +    +G      ++ ++A+A  E++   Q      EV +N S+AST A   
Sbjct: 299 ATADLNQVMTEAEQGVERQKSESDQVATAMNEMTAAAQ------EVASNASEASTAADHA 352

Query: 421 GSKVISAAIGSLREVGSILQSAASH-------IQQLEQASAKVDSVMDIINGIAEQTNLL 473
             +V  A  G + +   ++   +         I+QL   S ++DSV+++I  IA+QTNLL
Sbjct: 353 NGQVCDAQ-GLVHQATEVIGGLSEQVGEGVRVIEQLGTDSRRIDSVLEVIREIADQTNLL 411

Query: 474 ALNAAIEAACAGEQGRGFAVVADEVRSLAVRTVNAVSEISGTIETMKKESAEVILFMNQS 533
           ALNAAIEAA AGE GRGFAVVADEVR+LA RT  +  EI   IE ++  +   +  +   
Sbjct: 412 ALNAAIEAARAGEAGRGFAVVADEVRTLARRTQQSTQEIQDMIERLQSGAGNAVKVIASI 471

Query: 534 EQTMEEGQSKGNQAMQALQRITQGTDEAASQTERIFSSIKELSATSQAMAESMSQISSAM 593
            +  E    +  Q   ALQRI Q          +I S+ +E ++ S+ + +++ +I +  
Sbjct: 472 SERSEATVEETRQVNDALQRIGQAVATITDMNTQIASAAEEQTSVSETINQNVHEIVAIT 531

Query: 594 QALESYNTQLRVTSREVETRAESLEHDCRRF 624
           +       +    ++ ++  A  +     R+
Sbjct: 532 EQTAQGTRRAGNATQRLKNLASEMSEQVSRY 562



 Score = 38.5 bits (88), Expect = 8e-07
 Identities = 64/351 (18%), Positives = 136/351 (38%), Gaps = 44/351 (12%)

Query: 109 LQQAVQAFNDDMQPWLEIKGELGFNVDDGKLAELKKLAVTIEKKIDETGMVTINSDFQAM 168
           L+ AV A ND         G+L   +D     EL +LA       D              
Sbjct: 239 LKSAVSAMNDIASG----DGDLTRRLDVSGKDELGQLATAFNSFAD-------------- 280

Query: 169 IKAQQNYLLQPNEQNLRLFNRALAGFVS-MSQSYAMLDLYKAEIEQFKTTFLRVSELSQQ 227
              Q + L++    + R  N A A     M+++   ++  K+E +Q  T    ++  +Q+
Sbjct: 281 ---QVHGLVERVLSSTRTLNEATADLNQVMTEAEQGVERQKSESDQVATAMNEMTAAAQE 337

Query: 228 VKDIEKNLLSSEATAQGVIESTAQRLEEVSSRYQSLAEKAGEQTLLSILVACVILAVLTV 287
           V        ++   A G +      + + +     L+E+ GE   +   +      + +V
Sbjct: 338 VASNASEASTAADHANGQVCDAQGLVHQATEVIGGLSEQVGEGVRVIEQLGTDSRRIDSV 397

Query: 288 LLFMMVSFSLSKALTQIGRVLEKLSSGDLSQRLALISNKKDEFNQLAFAVNKSCENLGGL 347
            L ++   +    L  +   +E   +G+  +  A+++   DE   LA    +S + +  +
Sbjct: 398 -LEVIREIADQTNLLALNAAIEAARAGEAGRGFAVVA---DEVRTLARRTQQSTQEIQDM 453

Query: 348 VHVVQ--------------DRSVALSGDAVALNQAIDNLVRGQSDVMDQTQRLASATEEV 393
           +  +Q              +RS A   +   +N A+  + +  + + D   ++ASA EE 
Sbjct: 454 IERLQSGAGNAVKVIASISERSEATVEETRQVNDALQRIGQAVATITDMNTQIASAAEEQ 513

Query: 394 SLTTQQVSHSLEVVANVSKASTLAAAEGSKVISAAIGSLREVGSILQSAAS 444
           +  ++ ++ ++  +     A T   A+G++    A   L+ + S +    S
Sbjct: 514 TSVSETINQNVHEIV----AITEQTAQGTRRAGNATQRLKNLASEMSEQVS 560