Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 628 a.a., methyl-accepting chemotaxis sensory transducer from Marinobacter adhaerens HP15

 Score =  162 bits (409), Expect = 5e-44
 Identities = 113/387 (29%), Positives = 197/387 (50%), Gaps = 8/387 (2%)

Query: 238 SEATAQGVIESTAQRLEEVSSRYQSLAEKAGEQTLLSILVACVILAVLTVLLFMMVSFSL 297
           SEA        T    +++++  QS         ++ ++V+ VIL  L + + M     L
Sbjct: 248 SEARGVQWYLGTFVNADKINAPVQSARMTGLIMAVIGLIVSLVILH-LGIKVLMAPVRRL 306

Query: 298 SKALTQIGRVLEKLSSGDLSQRLALISNKKDEFNQLAFAVNKSCENLGGLVHVVQDRSVA 357
           +KA+  IG         DL+QRL    + +DEF +LA + N+  EN+  +V  VQ  S  
Sbjct: 307 NKAMADIGS-----GDADLTQRLD--DSARDEFGELARSFNQFVENIQTVVRDVQKGSAE 359

Query: 358 LSGDAVALNQAIDNLVRGQSDVMDQTQRLASATEEVSLTTQQVSHSLEVVANVSKASTLA 417
           L  +  +L                +   +A+A  E+S    +++ + +  A+ +  +   
Sbjct: 360 LGENVSSLRDTASTSRSSVESQQAEIDMVATAINEMSAAAGEIAQNAQQTADAANNADAD 419

Query: 418 AAEGSKVISAAIGSLREVGSILQSAASHIQQLEQASAKVDSVMDIINGIAEQTNLLALNA 477
           +    + ++A+  +++++   + +AA  I  L +    + +V+++I GIAEQTNLLALNA
Sbjct: 420 SRASLETVAASRDAVQKLSKEINAAAEVIHTLGKDVTSITTVLEVIQGIAEQTNLLALNA 479

Query: 478 AIEAACAGEQGRGFAVVADEVRSLAVRTVNAVSEISGTIETMKKESAEVILFMNQSEQTM 537
           AIEAA AGE GRGFAVVADEVR+LA RT ++  EI+  IE ++K + + +  MN S    
Sbjct: 480 AIEAARAGEAGRGFAVVADEVRNLAQRTQSSTEEINDMIERLQKGANDAVDVMNASTAVS 539

Query: 538 EEGQSKGNQAMQALQRITQGTDEAASQTERIFSSIKELSATSQAMAESMSQISSAMQALE 597
                K   AM AL RI +     +  T +I ++ +E ++ ++ +  S+++I+   Q   
Sbjct: 540 NVSMEKAQDAMDALNRIAEAITSISQMTSQIATASEEQTSVTEELNSSITRIADQGQEAA 599

Query: 598 SYNTQLRVTSREVETRAESLEHDCRRF 624
           +  T+  V S ++E    +L  +  RF
Sbjct: 600 AAATENDVYSGQIERIGTALNQNVSRF 626



 Score = 41.6 bits (96), Expect = 1e-07
 Identities = 57/290 (19%), Positives = 119/290 (41%), Gaps = 35/290 (12%)

Query: 211 IEQFKTTFLRVSELSQQVKDIEKNLLSSEATAQGVIESTAQRLEEVSSRYQSLAEKAGEQ 270
           +E  +T    V + S ++ +   +L  + +T++  +ES    ++ V++    ++  AGE 
Sbjct: 343 VENIQTVVRDVQKGSAELGENVSSLRDTASTSRSSVESQQAEIDMVATAINEMSAAAGEI 402

Query: 271 TLLSILVACVILAVLTVLLFMMVSFSLSKALTQIGRVLEKL-SSGDLSQRLALISNKKDE 329
              +                   + + + A       LE + +S D  Q+L+   N   E
Sbjct: 403 AQNA----------------QQTADAANNADADSRASLETVAASRDAVQKLSKEINAAAE 446

Query: 330 FNQLAFAVNKSCENLGGLVHVVQDRSVALSGDAVALNQAIDNLVRGQS---------DVM 380
              +   + K   ++  ++ V+Q   +A   + +ALN AI+    G++         +V 
Sbjct: 447 ---VIHTLGKDVTSITTVLEVIQ--GIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVR 501

Query: 381 DQTQRLASATEEVSLTTQQVSHSLEVVANVSKASTLAAAEGSKVISAAIGSLREVGSILQ 440
           +  QR  S+TEE++   +++        +V  AST  +    +    A+ +L  +   + 
Sbjct: 502 NLAQRTQSSTEEINDMIERLQKGANDAVDVMNASTAVSNVSMEKAQDAMDALNRIAEAIT 561

Query: 441 SAASHIQQLEQASAKVDSVMDIING----IAEQTNLLALNAAIEAACAGE 486
           S +    Q+  AS +  SV + +N     IA+Q    A  A      +G+
Sbjct: 562 SISQMTSQIATASEEQTSVTEELNSSITRIADQGQEAAAAATENDVYSGQ 611