Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., methyl-accepting chemotaxis protein (NCBI) from Shewanella oneidensis MR-1

 Score =  164 bits (415), Expect = 9e-45
 Identities = 122/441 (27%), Positives = 220/441 (49%), Gaps = 26/441 (5%)

Query: 199 QSYAMLDLYKAEIEQFKTTFLRVSELSQQVK-----------DIEKNLLSSEATAQGVIE 247
           Q Y   +L K E +  +      +  +QQ++           D+   L         VI+
Sbjct: 97  QKYLATELTKEESQLTQQAAPLFTAANQQIEQLVSYLRSFNGDVAHQLNDKILPLYQVID 156

Query: 248 STAQRLEEVSSRYQSLAEK--AGEQTL----LSILVACVILAVL-TVLLFMMVSFSLSKA 300
             +  + E+++    +A+K  A ++ L    ++I +    LA+L ++L+ + V  S+   
Sbjct: 157 PISSTISELTALQIKIADKEIAVDKELYDSSITIFITLAGLAILLSILIGLWVKRSVMNP 216

Query: 301 LTQIGRVLEKL-SSGDLSQRLALISNKKDEFNQLAFAVNKSCENLGGLVHVVQDRSVALS 359
           +  I R L+ +    DL+ +    ++  DE   ++ ++ +  E+L G++H + + +  ++
Sbjct: 217 INDIVRNLKTIRQDSDLTVKFHTFND--DELGLISTSLTQVIEHLRGILHSIAEAANTVT 274

Query: 360 GDAVALNQAIDNLVRGQSDVMDQTQRLASATEEVSLTTQQVSHSLEVVANVSKASTLAAA 419
             A  L+       +       +T++ A+A  E++ T  +V+ S    AN +K +   AA
Sbjct: 275 SSATELSSFTQETNKRMQQQQAETEQTATAMNEMTATVAEVAQSTSAAANSAKDADTYAA 334

Query: 420 EGSKVISAAIGSLREVGSILQSAASHIQQLEQASAKVDSVMDIINGIAEQTNLLALNAAI 479
            G++++  +I S+ ++   +Q  A  I  L   S  +  V+D+I  IAEQTNLLALNAAI
Sbjct: 335 NGNRIVIDSISSMSQLSEQIQKTAQVIGFLSNESQNIGRVLDVIKSIAEQTNLLALNAAI 394

Query: 480 EAACAGEQGRGFAVVADEVRSLAVRTVNAVSEISGTIETMKKESAEVILFMNQSEQTMEE 539
           EAA AGEQGRGFAVVADEVR+LA RT  +  EI   I T+++   + +  M    + +++
Sbjct: 395 EAARAGEQGRGFAVVADEVRTLAQRTQKSTQEIEAMIATLQQGVKQAVSAMEVGIKQVDD 454

Query: 540 GQSKGNQAMQALQRITQGTDEAASQTERIFSSIKELSATSQAMAESMSQIS-----SAMQ 594
             +K NQA QAL+ I    D  A     I ++ +E S+ ++ +  S+  IS     +   
Sbjct: 455 ANNKANQAGQALKEIVASVDNIAELNTHIATAAEEQSSVAENINRSIIAISDITDDATRS 514

Query: 595 ALESYNTQLRVTSREVETRAE 615
           ALE   + + +T      R++
Sbjct: 515 ALELSESVINLTKLANSMRSQ 535