Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 634 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  164 bits (414), Expect = 1e-44
 Identities = 110/344 (31%), Positives = 188/344 (54%), Gaps = 9/344 (2%)

Query: 262 SLAEKAGEQTLLSILVACVILAVLTVLLFMMVSFSLSKALTQ-IGRVLEKLSS-----GD 315
           +L     EQ +  I    +++  +  L+   +++ ++K++T+ I      L+      GD
Sbjct: 266 ALDRSHSEQAMSDIRFKLIMIGFIAFLIGTAIAWFIAKSITRPIAETTNALNDIAEGEGD 325

Query: 316 LSQRLALISNKKDEFNQLAFAVNKSCENLGGLVHVVQDRSVALSGDAVALNQAIDNLVRG 375
           L++R+ + S  KDE  QLA A N+  E +   V  V D +  L+  A  ++   +   + 
Sbjct: 326 LTRRIEVKS--KDEIAQLALAFNRFAEKIHATVAQVSDSTSLLATSAEEMSAITNETQQM 383

Query: 376 QSDVMDQTQRLASATEEVSLTTQQVSHSLEVVANVSKASTLAAAEGSKVISAAIGSLREV 435
                 +T+++A+A  E++ T Q+V+H+    A+ +  ++ +   G  ++   I ++  +
Sbjct: 384 AKRQHLETEQVATAMNEMAATVQEVAHNATDAADAATHASESTEHGKLLVEKVISTISLL 443

Query: 436 GSILQSAASHIQQLEQASAKVDSVMDIINGIAEQTNLLALNAAIEAACAGEQGRGFAVVA 495
              +  AA  I +LE+ +A++DSV+ +I  IA+QTNLLALNAAIEAA AGEQGRGFAVVA
Sbjct: 444 ADEIAHAAKAINELERNTAQIDSVLVVIRNIADQTNLLALNAAIEAARAGEQGRGFAVVA 503

Query: 496 DEVRSLAVRTVNAVSEISGTIETMKKESAEVILFMNQSEQTMEEGQSKGNQAMQALQRIT 555
           DEVR+LA RT  + SEI   IE ++  +   +  MN S  T +   S  ++A +AL+ IT
Sbjct: 504 DEVRTLASRTQASTSEIQQMIEALQHSAKSTVSTMNTSTATTQNCVSLVHEAGEALEAIT 563

Query: 556 QGTDEAASQTERIFSSIKELSATSQAMAESMSQISS-AMQALES 598
           Q     +    +I S+  E  A S  + ++++ I+   + A ES
Sbjct: 564 QAVSTISQMNIQIASAANEQCAVSAEINKNVNNINDITINATES 607