Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  150 bits (378), Expect = 2e-40
 Identities = 105/350 (30%), Positives = 185/350 (52%), Gaps = 12/350 (3%)

Query: 253 LEEVSSRY-QSLAEKAGEQTLLSILVACVILAVLTVLLFMMVSFSLSKALTQIGRVLEKL 311
           +E V   Y Q++ E+  E++L+ +L+A V+    T  + M+ +  +   +  +   L  +
Sbjct: 181 IEAVVEDYRQTVTEQMAEKSLMILLIALVLTGA-TAFVIMVAAHRMVVPIKNMADNLNDI 239

Query: 312 SSG--DLSQRLALISNKKDEFNQLAFAVNKSCENLGGLVHVVQDRSVALSGDAVALNQAI 369
           + G  DL++RL++    +DE  QL  A N   + L    H++ D + A +    A N   
Sbjct: 240 AKGEGDLTKRLSV--KGEDEIAQLGRAFNLFVDKLQ---HIIGDVASATAKVKTAANAIH 294

Query: 370 DNLVRGQSDVM---DQTQRLASATEEVSLTTQQVSHSLEVVANVSKASTLAAAEGSKVIS 426
           D      S ++   ++T ++ +A  E+S T  +V+ +   VA  ++A+T   A   + + 
Sbjct: 295 DQTKVMSSQLLSHNNETDQVVTAITEMSSTASEVAQNTTQVAEATQAATGDVANAQRCVD 354

Query: 427 AAIGSLREVGSILQSAASHIQQLEQASAKVDSVMDIINGIAEQTNLLALNAAIEAACAGE 486
           A++  +  +   +  AA  I+ L + S K++SV+ +I GIAEQTNLLALNAAIEAA AGE
Sbjct: 355 ASLEEIAALMEQINHAAGSIKSLSEQSQKINSVLSVIGGIAEQTNLLALNAAIEAARAGE 414

Query: 487 QGRGFAVVADEVRSLAVRTVNAVSEISGTIETMKKESAEVILFMNQSEQTMEEGQSKGNQ 546
           QGRGFAVVADEVRSLA RT  +  EI+  +  + K  ++ +  M++S+Q+          
Sbjct: 415 QGRGFAVVADEVRSLASRTQASTLEINEMLSALHKLVSQAVKTMDESQQSCVRSVESSRA 474

Query: 547 AMQALQRITQGTDEAASQTERIFSSIKELSATSQAMAESMSQISSAMQAL 596
             ++L  +T         + +I ++  E S+ ++ +  ++  I   +  L
Sbjct: 475 ISESLGSVTSAVTAINDMSTQIATAATEQSSVTEEINRNVYAIQEIVNEL 524