Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 495 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  163 bits (412), Expect = 2e-44
 Identities = 127/442 (28%), Positives = 226/442 (51%), Gaps = 26/442 (5%)

Query: 195 VSMSQSYAMLDLYKAEIEQFKTTFLRVSELSQ-QVKDIEKNLLSSEATAQGVIESTAQRL 253
           V+M+Q     D    +I    +  L+  ++ Q  V D    LL+ +  A+ V  S  Q  
Sbjct: 52  VTMAQPIFTYDY--EQIRAVLSVMLKSEQIYQITVVDHRGKLLAEDKQAEIVAASDLQTR 109

Query: 254 E-----------EVSSRYQSLAEKAGEQTLLS--ILVACVILAVLTVLLFMMVSFSLSKA 300
           E            ++  + +L  KA    LL    L A +ILA   +++F+++   +   
Sbjct: 110 ELQFSDQGNPTGRLTIAFSTLPVKAQLSDLLLGYFLQALLILAGSLLVIFIILKRLVISP 169

Query: 301 LTQIGRVLEKLSSGD--LSQRLALISNKKDEFNQLAFAVNKSCENLGGLVHVVQDRSVAL 358
           L ++   LE++++GD  LS RL + S  +DE  +LA A N   E + G +  V + S  L
Sbjct: 170 LDKVVAALEEIANGDGDLSHRLPVES--EDEIGKLANAFNGFVEQIHGTITRVHETSGLL 227

Query: 359 SGDAVAL---NQAIDNLVRGQSDVMDQTQRLASATEEVSLTTQQVSHSLEVVANVSKAST 415
            GDA AL   +Q+ +  V+ Q   + +T+   +A  ++S +  +V+ + +  A+ +  + 
Sbjct: 228 LGDAKALGTLSQSNNQRVQAQ---LKETEAAVTAVTQLSASANEVAINAKRTADAATQAD 284

Query: 416 LAAAEGSKVISAAIGSLREVGSILQSAASHIQQLEQASAKVDSVMDIINGIAEQTNLLAL 475
            A  +G +   + +   R++   L  +A  + QL+Q + ++D V+ +I+ IAEQTNLLAL
Sbjct: 285 RAVDDGQRQFDSGLAITRQLAGELARSAQSVSQLQQETQRIDEVVVVISSIAEQTNLLAL 344

Query: 476 NAAIEAACAGEQGRGFAVVADEVRSLAVRTVNAVSEISGTIETMKKESAEVILFMNQSEQ 535
           NAAIEAA AGEQGRGFAVVADEVRSLA RT  A  EI   I+ ++   AE +  M  S+ 
Sbjct: 345 NAAIEAARAGEQGRGFAVVADEVRSLASRTQQATGEIQKMIQQVQSRVAETVNVMQSSQT 404

Query: 536 TMEEGQSKGNQAMQALQRITQGTDEAASQTERIFSSIKELSATSQAMAESMSQISSAMQA 595
              +G ++  +    L ++T      ++    +  + +E +  ++A++ +++ +++   +
Sbjct: 405 LSNQGVNRSEEIKLVLSKVTDLVSNISNMNIEVSHAAQEQTCVTEAISRTLNDLANVSGS 464

Query: 596 LESYNTQLRVTSREVETRAESL 617
               +  L  +S  +  + E L
Sbjct: 465 ASLDSEHLAQSSERLFHQGERL 486