Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 533 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  151 bits (381), Expect = 8e-41
 Identities = 100/347 (28%), Positives = 178/347 (51%), Gaps = 2/347 (0%)

Query: 280 VILAVLTVLLFMMVSFSLSKALTQIGRVLEKLSSGDLSQRLALISNKKDEFNQLAFAVNK 339
           +IL +L   L  ++S S+ + L Q+   ++ +++G+L+ +LA+    KDE   LA  +N+
Sbjct: 189 LILILLMAALGYIISRSIVQPLDQVNNAMQIIATGNLTPQLAVTG--KDELAALAHNINQ 246

Query: 340 SCENLGGLVHVVQDRSVALSGDAVALNQAIDNLVRGQSDVMDQTQRLASATEEVSLTTQQ 399
           S  ++   +      +  +S  A  +    +   +  ++  DQ  +LA+A  E+S T   
Sbjct: 247 SMASIRTALAEANHSADNVSQAASRIASTAEETNQAVNNQRDQLAQLATAMNEMSATIAD 306

Query: 400 VSHSLEVVANVSKASTLAAAEGSKVISAAIGSLREVGSILQSAASHIQQLEQASAKVDSV 459
           V+++ E  A  +K +T  A  G K + A++  +  +   ++ A   + +L++   ++  V
Sbjct: 307 VANNAESTAKDTKEATREAGLGDKDVHASVDGIHALAKEVEQATQQVNKLKEEIMQISEV 366

Query: 460 MDIINGIAEQTNLLALNAAIEAACAGEQGRGFAVVADEVRSLAVRTVNAVSEISGTIETM 519
             +I+ I++QTNLLALNAAIEAA AGEQGRGFAVVADEVR LA RT  +  EI  TI  +
Sbjct: 367 TAVISAISDQTNLLALNAAIEAARAGEQGRGFAVVADEVRQLASRTRQSTEEIQNTISLL 426

Query: 520 KKESAEVILFMNQSEQTMEEGQSKGNQAMQALQRITQGTDEAASQTERIFSSIKELSATS 579
           ++ +      M+ S    E+   +  +A   L  I       +    +I ++ +E SA +
Sbjct: 427 QQRAVSAANAMDTSRDLAEKSVDQSTKAGNDLSLIVTHIKHVSDMATQIATAAEEQSAVA 486

Query: 580 QAMAESMSQISSAMQALESYNTQLRVTSREVETRAESLEHDCRRFTL 626
           + M  ++  I+S+   +    T L   S  +   + +L +    F L
Sbjct: 487 EEMNRNVCGINSSALEVSESATYLAQESESLAELSLNLNNKLAAFKL 533