Pairwise Alignments

Query, 342 a.a., DUF2219 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 353 a.a., Type I secretion system, outer membrane component LapE from Xanthomonas campestris pv. campestris strain 8004

 Score = 80.1 bits (196), Expect = 8e-20
 Identities = 73/307 (23%), Positives = 131/307 (42%), Gaps = 28/307 (9%)

Query: 42  IDNDGVFG---VDQNYTNGLFLSYTSGAITPY-----------WLAKPLSLSIWGAPSLD 87
           +DND +FG    DQ Y+NG  L+  S  +  Y           W+   L     G     
Sbjct: 44  VDND-LFGGEDQDQGYSNGALLTLVSPNLVDYTDDPCLPRTARWVNSYLERLHPGEFDQQ 102

Query: 88  KWEFTLGHKMWTPSDIELTKPQPNERPYAGYLHTEFNYLSLHPQQAQRFNLTLGMTGESA 147
              F++G  ++TP+D       P++RPYAG L   F Y + +    +   L +G+ G  A
Sbjct: 103 NMVFSIGQAIFTPTDYTRRDVIPDDRPYAGILLASFGYNARNDAHLRTTQLQIGVVGPWA 162

Query: 148 LSEEAQKLVHSITKSDEPNGWAYQVEDQLVGSLGYRSHFNWGRYHALAGTELELANISE- 206
            ++EAQ  +H     ++  GW  Q+ ++ + +L +     W     +         IS  
Sbjct: 163 FAQEAQDAIHDALGDEKFQGWDNQLHNEPLVNLVHERMRRWPGDATVNADGWGWDAISHW 222

Query: 207 -VNIGNFRSDLSSGLMLRWGTDLENNFGAAQISVENPFT-PGMIGASNQGW--FVFTGIE 262
             ++GN  + L++G  +R+G  L ++FG+         T P  +G ++ GW   +F   +
Sbjct: 223 GGSLGNMSTHLNAGGEVRFGWKLPDDFGSTPTRPAGENTAPSRLGRAS-GWSGHLFLTTD 281

Query: 263 GRYRFNDVTIEGDRPLNGLDQPAEYYQVHIEPWQATAVVGFAMYARSFGASLTFTANTPE 322
            R+   D+T++G+   N        + V   P       G A+    +  ++     T E
Sbjct: 282 ARWVIRDITLDGNTFRNS-------HSVDKRPLVGDVGYGLAVMYGRWKFAIARYHRTRE 334

Query: 323 FKEDKES 329
           F+  +E+
Sbjct: 335 FETQRET 341