Pairwise Alignments

Query, 517 a.a., DUF3360 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 491 a.a., Protein of unknown function (DUF3360). from Pseudomonas stutzeri RCH2

 Score =  559 bits (1441), Expect = e-164
 Identities = 280/493 (56%), Positives = 352/493 (71%), Gaps = 18/493 (3%)

Query: 14  SDIETKSYRELHRPASEFATRSEYLDHELQIMKPRRFGLNLPGRDFRFELEDLVPALAGT 73
           +D + +SY+ELH+P   FATRSEYL+HEL+IM P+R+G+NLP RD+RFE ED VPA+A T
Sbjct: 2   NDRDLRSYQELHKPKGNFATRSEYLEHELEIMAPKRWGINLPFRDYRFEYEDWVPAMAAT 61

Query: 74  IGIISMYSAVMMSWADGLTQAWDHINLGKEFAIEVARVEMLFPALFFCVIASGFLNPRAN 133
           IG I M +AV+ ++A  +        L  EF IE AR EML  A+ F V+ SGFLNP AN
Sbjct: 62  IGKIVMVAAVVAAFAGPM-------GLSNEFVIENARYEMLIAAVLFVVLFSGFLNPTAN 114

Query: 134 LAGNHGPMIPLIGSIALAGAHPLALAILLGVFGLLLSYFKGGSKLVNLTSEGTAGGLLIF 193
           LAG HGP+IPLI  I  +G HP+AL I++GV G  L  FKGGS L  LTS+G  GGLL++
Sbjct: 115 LAGTHGPLIPLIPLIVASGGHPMALGIMVGVLGFTLGVFKGGSLLARLTSDGVCGGLLLY 174

Query: 194 LGFTGTMSQITSIQEWAVGLQSADVAAGSMGYIGLVVLGVNIVIYALLAKFNLRWLAIPV 253
           LGF G  SQI  +  WA            MGYI  VV+   IV+YA L    +RWLAIP+
Sbjct: 175 LGFIGITSQIKKLFGWADSFD--------MGYIAFVVVFATIVMYAYLEHIRMRWLAIPL 226

Query: 254 CAFTGLVIALALGAGFDLKFETQMGLPNLNPVYWWGSTEQGWMLGMPTLQHFIASLPFAI 313
            +    +IA  +GA F+  F T+ G+PNLNP+YWWG T  GW +G+P L HFIA  PFA+
Sbjct: 227 GSALAALIAFVMGAPFE--FTTEPGIPNLNPMYWWGETT-GWQIGLPDLHHFIAVAPFAV 283

Query: 314 LAVAMWSPDFLGHRIFQELNYPKRTEKVLMDVDDTMTMCSIRQMVGTALGGGNITSSWGT 373
           LAVAMWSPDFLGHR+FQ+LNYP + +KVLM++DDTM + + RQ+VGT+LGGGN+ SSWGT
Sbjct: 284 LAVAMWSPDFLGHRVFQQLNYPPKAKKVLMNIDDTMCVAAARQIVGTSLGGGNLASSWGT 343

Query: 374 YMIPAAIAKRPIPGGAIILGCLVMTIAILGFPMDAAVWPPVMRCALLVGVFLPLLEAGMQ 433
           +M+PAAIAKRPIP GA++ G L +  A+ G+PMD A+WPPV+  AL+VGVFLPLLEAGMQ
Sbjct: 344 FMVPAAIAKRPIPAGALLTGLLCVVAALWGYPMDLAIWPPVLSVALMVGVFLPLLEAGMQ 403

Query: 434 MIKNTKDSQAAGICIFGSAVVNPVLAWALTMLLDNNGLIGDKERAAKLSFIDKVVIPGGV 493
           M +  K SQ+A I IF SA+VNPV  W+LT+LLDN GLIGDKER   LS + + VIP  V
Sbjct: 404 MTREGKTSQSAAIVIFSSALVNPVFGWSLTVLLDNLGLIGDKERGQSLSHLHRWVIPTIV 463

Query: 494 LIICLIAMLAVGM 506
            I+    ML +GM
Sbjct: 464 FIVLCAVMLGIGM 476