Pairwise Alignments

Query, 260 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 257 a.a., L-Arginine ABC transporter, periplasmic substrate-binding component (from data) from Pseudomonas fluorescens FW300-N2E2

 Score =  236 bits (602), Expect = 4e-67
 Identities = 123/259 (47%), Positives = 173/259 (66%), Gaps = 3/259 (1%)

Query: 3   MKKWLVATALIATTISGVTQAKEWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALCA 62
           MKK ++  AL  + +S  T A E K ++ GIE AYPPF+    DGS+ GFD D+ NALC 
Sbjct: 1   MKKLVLLGALALSVLSLPTFADE-KPLKIGIEAAYPPFASKAPDGSIVGFDYDIGNALCE 59

Query: 63  EMQVECKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKKKVDFTGKYAQIPNKFIAKKG 122
           EM+V+C  V Q++DG+IP+L  RK DAI+++MSITE+RKK VDFT KY   P + + K G
Sbjct: 60  EMKVKCVWVEQEFDGLIPALKVRKIDAILSSMSITEDRKKSVDFTNKYYNTPARLVMKAG 119

Query: 123 ADLAFTKEGLKGVKIGVQRATTHDKYITDNYGDT-VDIVRYGSFDEAYLDLANGRIAAVL 181
             ++     LKG  IGVQR + H+++  +       +I  YGS +E YLD++ GR+   +
Sbjct: 120 TQVSDNLAELKGKNIGVQRGSIHERFAREVLAPLGAEIKPYGSQNEIYLDVSAGRLDGTV 179

Query: 182 GDASALEEGMLNKPGGDAYEFVGPSLTDPKWFGEGMGIAVRKQDKELTEKLDAAITALRE 241
            DA+ L++G L    G  + FVGP+ TD K+FG+G+GIAVRK D  L +K++ AITA+RE
Sbjct: 180 ADATLLDDGFLKTDAGKGFAFVGPAFTDEKYFGDGIGIAVRKGD-ALKDKINGAITAIRE 238

Query: 242 KGIYQQIQAKYFKYDVYGE 260
            G Y+QIQ KYF +D+YG+
Sbjct: 239 NGKYKQIQDKYFAFDIYGK 257