Pairwise Alignments

Query, 260 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 244 a.a., Arginine/ornithine ABC transporter, periplasmic arginine/ornithine binding protein from Pseudomonas fluorescens FW300-N2E2

 Score =  224 bits (571), Expect = 1e-63
 Identities = 114/235 (48%), Positives = 158/235 (67%), Gaps = 2/235 (0%)

Query: 27  KTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALCAEMQVECKIVPQDWDGIIPSLLARK 86
           KT+R GIE AYPPF+   ++G + GFD D+ NALCA+MQV+C+ +  ++DG+IP+L  +K
Sbjct: 11  KTLRIGIEAAYPPFASKTSEGKIVGFDYDIGNALCAQMQVKCEWIEGEFDGLIPALKVKK 70

Query: 87  YDAIIAAMSITEERKKKVDFTGKYAQIPNKFIAKKGADLAFTKEGLKGVKIGVQRATTHD 146
            D  +++M+ITEERKK VDFT KY    ++ + K+GA +      LKG  +GVQRATT D
Sbjct: 71  IDLALSSMTITEERKKSVDFTHKYYFTSSRLVMKEGAVVDDQYVNLKGKTVGVQRATTTD 130

Query: 147 KYITDNYGDT-VDIVRYGSFDEAYLDLANGRIAAVLGDASALEEGMLNKPGGDAYEFVGP 205
           +Y T+      V + RY + +E Y+DLA+GR+ A+  D   LE+  L+ P G  Y FVGP
Sbjct: 131 RYATEVLEPKGVSVKRYSNNEEIYMDLASGRLDAIFADTIPLED-FLSMPRGKGYAFVGP 189

Query: 206 SLTDPKWFGEGMGIAVRKQDKELTEKLDAAITALREKGIYQQIQAKYFKYDVYGE 260
            L DPK+ GEG GIAVRK + +L   L+ AI  +R  G YQ+IQ KYFK D+YG+
Sbjct: 190 ELKDPKYVGEGAGIAVRKGNTQLVADLNKAIDGIRANGEYQKIQGKYFKSDIYGD 244