Pairwise Alignments

Query, 260 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., ABC transporter for L-Lysine, periplasmic substrate-binding component (from data) from Pseudomonas fluorescens FW300-N2E2

 Score =  178 bits (451), Expect = 1e-49
 Identities = 97/253 (38%), Positives = 144/253 (56%), Gaps = 7/253 (2%)

Query: 4   KKWLVATALIATTISGVTQAKEWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALCAE 63
           K  L  +AL     +GV  AKE+K +RFG++ +Y PF    ADGSL GFD+D+ NA+CAE
Sbjct: 3   KALLTLSALALCMAAGVATAKEYKELRFGVDPSYAPFESKAADGSLVGFDIDLGNAICAE 62

Query: 64  MQVECKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKKKVDFTGKYAQIPNKFIAKKGA 123
           ++V+CK V  D+DG+IP L A K+D +I++M++T  R+K +DF+ +    P  ++ KKG+
Sbjct: 63  LKVKCKWVESDFDGMIPGLKANKFDGVISSMTVTPAREKAIDFSSELFSGPTAYVFKKGS 122

Query: 124 DLAFTKEGLKGVKIGVQRATTHDKY---ITDNYGDTVDIVRYGSFDEAYLDLANGRIAAV 180
            L+     LKG  +G ++ T  + Y   + D  G  V    Y + D+ Y DL +GR+ A 
Sbjct: 123 GLSEDVASLKGKTVGYEQGTIQEAYAKAVLDKAG--VKTQAYQNQDQVYADLTSGRLDAA 180

Query: 181 LGDASALEEGMLNKPGGDAYEFVGPSLTDPKWFGEGMGIAVRKQDKELTEKLDAAITALR 240
           + D    E G L  P G+ YE   P   D +       I +RK + EL   L+  I AL 
Sbjct: 181 IQDMLQAELGFLKSPKGEGYEVSKP--VDSELLPSKTAIGIRKGNSELKALLNKGIKALH 238

Query: 241 EKGIYQQIQAKYF 253
           + G Y +IQ K+F
Sbjct: 239 DDGKYAEIQKKHF 251