Pairwise Alignments

Query, 260 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., Arginine/ornithine ABC transporter, periplasmic arginine/ornithine binding protein from Pseudomonas fluorescens FW300-N2E2

 Score =  227 bits (579), Expect = 2e-64
 Identities = 110/261 (42%), Positives = 171/261 (65%), Gaps = 2/261 (0%)

Query: 1   MDMKKWLVATALIATTISGVTQAKEWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANAL 60
           M++K+  +   L++    G +      ++R GIE AYPPF+    D ++ GFD D+  AL
Sbjct: 1   MNVKRIALKLGLVSLLAFGTSLQAAESSLRIGIEAAYPPFASKTPDNAIVGFDYDIGQAL 60

Query: 61  CAEMQVECKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKKKVDFTGKYAQIPNKFIAK 120
           CAEM+V C    Q++DG+IP+L  +K DA+I++MSIT ER K VDFT +Y +IP + + +
Sbjct: 61  CAEMKVRCVWQEQEFDGLIPALKVKKVDAVISSMSITPERLKSVDFTDRYYRIPARLVFR 120

Query: 121 KGADLAFTKEGLKGVKIGVQRATTHDKYITDNYGDT-VDIVRYGSFDEAYLDLANGRIAA 179
           KG+ +      L G +IGVQRAT  D+Y+TD++     ++VRYGS +E +LDL  GR+ A
Sbjct: 121 KGSGINDIPAQLNGKRIGVQRATNFDRYVTDHFAPAGAEVVRYGSQNEIFLDLLGGRLDA 180

Query: 180 VLGDASALEEGMLNKPGGDAYEFVGPSLTDPKWFGEGMGIAVRKQDKELTEKLDAAITAL 239
            +  +  ++E +L +P G+ +EFVGP+ T+ ++FG G+GIAVRK D  L  + + A+  +
Sbjct: 181 TMASSVVIDESLLKRPEGNDFEFVGPNFTEEQYFGTGIGIAVRKND-TLAGRFNQALATI 239

Query: 240 REKGIYQQIQAKYFKYDVYGE 260
           R  G Y++I+ KYF +D+YGE
Sbjct: 240 RANGTYERIRQKYFDFDIYGE 260