Pairwise Alignments

Query, 260 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 254 a.a., amino acid ABC transporter substrate-binding protein, PAAT family from Pseudomonas syringae pv. syringae B728a

 Score =  177 bits (450), Expect = 1e-49
 Identities = 105/257 (40%), Positives = 154/257 (59%), Gaps = 18/257 (7%)

Query: 7   LVATALIATTISGVTQAKEWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALCAEMQV 66
           L+A A +A + S   +     T++ GIEGAYPPF+  +A G + GFD ++  ALCA+M+V
Sbjct: 9   LIAAATLAFSGSAFAE-----TMKMGIEGAYPPFNNKDASGQVVGFDYEIGQALCAKMKV 63

Query: 67  ECKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKKKVDFTGKYAQIPNKFIAKKGADLA 126
           EC+ V  DWDGIIP+L+A K+D +I+++SITEERK+ VDFT  Y     +FIA K + + 
Sbjct: 64  ECEAVTSDWDGIIPALMANKFDFLISSLSITEERKQVVDFTNPYYSNKLQFIAPKTSSID 123

Query: 127 FT-----KEGLKGVKIGVQRATTHDKYITDNYGDTVDIVRYGSFDEAYLDLANGRIAAVL 181
            +     KE L G  +G QR+T    ++ D  G  +D   Y + + A+LDL++GR+ A+L
Sbjct: 124 VSSVEKAKESLAGKSVGAQRSTLAATWLEDKLG-IMDAKLYDTQENAFLDLSSGRVDAML 182

Query: 182 GDASALEEGMLNKPGGDAYEFVG-PSLTDPKWFGEGMGIAVRKQDKELTEKLDAAITALR 240
            D     E  L    G  +EF G P + D K     +GIAVRK D  L E+L+AA+  + 
Sbjct: 183 ADKYVSFE-WLKSEAGQNFEFKGEPVVEDDK-----IGIAVRKGDDALRERLNAALKEII 236

Query: 241 EKGIYQQIQAKYFKYDV 257
             G Y++I  KYF + +
Sbjct: 237 ADGTYKKINDKYFPFSI 253