Pairwise Alignments

Query, 260 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., amino acid ABC transporter substrate-binding protein, PAAT family from Pseudomonas syringae pv. syringae B728a

 Score =  175 bits (443), Expect = 1e-48
 Identities = 95/253 (37%), Positives = 140/253 (55%), Gaps = 7/253 (2%)

Query: 4   KKWLVATALIATTISGVTQAKEWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALCAE 63
           K WL  +AL     +G T AKE+K +RFG++ +Y PF    ADGSL GFD+D+ NA+C E
Sbjct: 3   KAWLTLSALALCIAAGNTMAKEYKELRFGVDPSYAPFESKAADGSLVGFDIDLGNAICKE 62

Query: 64  MQVECKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKKKVDFTGKYAQIPNKFIAKKGA 123
           ++V+CK V  D+DG+IP L ARK+D +I++M++T  R+K + F+ +    P   + KKGA
Sbjct: 63  LKVKCKWVESDFDGMIPGLKARKFDGVISSMTVTPAREKVIYFSNELFSGPTSLVFKKGA 122

Query: 124 DLAFTKEGLKGVKIGVQRATTHDKY---ITDNYGDTVDIVRYGSFDEAYLDLANGRIAAV 180
                   LKG  +G ++ T  + Y   + D  G  +    Y + D+ Y DL +GR+ A 
Sbjct: 123 GFTADPASLKGKTVGYEQGTIQEAYAKAVLDKAG--ISTKAYANQDQVYSDLTSGRLDAS 180

Query: 181 LGDASALEEGMLNKPGGDAYEFVGPSLTDPKWFGEGMGIAVRKQDKELTEKLDAAITALR 240
           + D    E G L  P G  YE   P   D +       I + + +KEL   LD  I A+ 
Sbjct: 181 IQDMLQAELGFLKSPAGADYEVSKP--IDSELLPAKTAIGIAQGNKELKALLDKGIEAMH 238

Query: 241 EKGIYQQIQAKYF 253
           + G Y +IQ K+F
Sbjct: 239 KDGTYAEIQKKHF 251