Pairwise Alignments

Query, 260 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., periplasmic binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  191 bits (485), Expect = 1e-53
 Identities = 107/260 (41%), Positives = 151/260 (58%), Gaps = 4/260 (1%)

Query: 3   MKKWLVATALIAT-TISGVTQAKEWKTVRFGIEGA-YPPFSWTEADGSLKGFDVDMANAL 60
           MKK L   AL A   I+G   A   + V+ GI    YPPF+  +A G+ +G++++   A+
Sbjct: 1   MKKTLKLVALAAALAITGAATASA-QQVKVGIAAEPYPPFTSPDASGNWEGWEIEFMKAM 59

Query: 61  CAEMQVECKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKKKVDFTGKYAQIPNKFIAK 120
           CAE +++C + P  WDGIIP+L ++K D II +MSIT ER K +DF+ KY   P   I  
Sbjct: 60  CAEAKLDCVVTPVAWDGIIPALTSKKIDMIIGSMSITAERLKTIDFSDKYYNTPTGIIGA 119

Query: 121 KGADLAFTKEGLKGVKIGVQRATTHDKYITDNYGDT-VDIVRYGSFDEAYLDLANGRIAA 179
           KG D+  T EGL G  IGVQ +T H  Y   ++    V++  Y + DEA  DLA GR+ A
Sbjct: 120 KGDDIKPTPEGLAGKTIGVQVSTVHQAYAMKHFAPAGVEVKEYQTQDEANQDLAAGRVDA 179

Query: 180 VLGDASALEEGMLNKPGGDAYEFVGPSLTDPKWFGEGMGIAVRKQDKELTEKLDAAITAL 239
           V  DA AL+  + +  G    ++ G    D    G G+G+ +RK + EL EK++AAI A+
Sbjct: 180 VQADAIALDAFLKSDQGKQCCDYKGEVAEDVDVIGPGVGVGLRKGETELKEKVNAAIKAI 239

Query: 240 REKGIYQQIQAKYFKYDVYG 259
           RE G Y     KYF +D+YG
Sbjct: 240 RENGTYDAFSKKYFDFDIYG 259