Pairwise Alignments

Query, 260 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., L-lysine ABC transporter, substrate-binding component (from data) from Sinorhizobium meliloti 1021

 Score =  217 bits (553), Expect = 2e-61
 Identities = 120/252 (47%), Positives = 158/252 (62%), Gaps = 4/252 (1%)

Query: 9   ATALIATTISGVTQAKEWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALCAEMQVEC 68
           A+A +   ++GV  A+  K V  G EGAYPPF+  E+DG+L GFD+D+A ALC EM+ EC
Sbjct: 11  ASAAVFVLMAGVAMAEGEKVV-IGTEGAYPPFNNLESDGTLTGFDIDIAKALCEEMKAEC 69

Query: 69  KIVPQDWDGIIPSLLARKYDAIIAAMSITEERKKKVDFTGKYAQIPNKFIAKKGADLA-F 127
             V QDWDGIIP+L+A+K+DAI+A+MSITEERK++VDFT KY   P   +  K + +   
Sbjct: 70  TFVTQDWDGIIPALIAKKFDAIVASMSITEERKQQVDFTNKYYNTPPAIVVPKDSPITEA 129

Query: 128 TKEGLKGVKIGVQRATTHDKYITDNYGDTVDIVRYGSFDEAYLDLANGRIAAVLGDASAL 187
           T   L G  +G Q +TTH  Y   +  ++ ++  Y + DE  LDLANGRI A + D   L
Sbjct: 130 TAAALSGKALGAQGSTTHSNYAEAHMKES-EVKLYPTADEYKLDLANGRIDAAIDDVVVL 188

Query: 188 EEGMLNKPGGDAYEFVGPSLTDPKWFGEGMGIAVRKQDKELTEKLDAAITALREKGIYQQ 247
            E  L    G   + +G    DP   GEG GIA+RK D  L EKL+ AI A+R  G Y+Q
Sbjct: 189 SE-WLKTEDGACCKLLGTLPIDPVINGEGAGIAIRKGDDALREKLNKAIEAIRANGKYKQ 247

Query: 248 IQAKYFKYDVYG 259
           I  KYF +DVYG
Sbjct: 248 INEKYFPFDVYG 259