Pairwise Alignments

Query, 260 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 244 a.a., arginine ABC transporter substrate-binding protein from Rahnella sp. WP5

 Score =  178 bits (452), Expect = 8e-50
 Identities = 100/252 (39%), Positives = 148/252 (58%), Gaps = 12/252 (4%)

Query: 3   MKKWLVATALIATTISGVTQAKEWKTVRFGIEGAYPPFSWTEADGSLKGFDVDMANALCA 62
           MKK L+  AL++ T+   T A    T+RFG    YPPF    AD  + GFD+D+ANALC 
Sbjct: 1   MKK-LILAALLSATVFTATAAD---TIRFGTSATYPPFESIGADNQIIGFDIDLANALCK 56

Query: 63  EMQVECKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKKKVDFTGKYAQIPNKFIAKKG 122
           +MQ  C    Q +DG+IP+L  R++D II+ M ITEER K+V FT  Y       I  KG
Sbjct: 57  QMQETCTFTNQPFDGLIPALKFRRFDVIISGMDITEERSKQVTFTQPYYANTAMIIGPKG 116

Query: 123 ADLAFTKEGLKGVKIGVQRATTHDKYITDNYGDTVDIVRYGSFDEAYLDLANGRIAAVLG 182
              +     LKG ++G++  TTH KY+ + + + +  V Y S+  A LDL +GR+  +LG
Sbjct: 117 KFASIA--DLKGKRVGLENGTTHQKYLMEKHPE-ITTVGYDSYQNAILDLKSGRLDGLLG 173

Query: 183 DASALEEGMLNKPG-GDAYEFVGPSLTDPKWFGEGMGIAVRKQDKELTEKLDAAITALRE 241
           D + L   + + P  G+    VG  + DP++FG G+G+AVR  +KEL  KL+ A+  ++ 
Sbjct: 174 DTAVLNGWLKSNPNLGE----VGELIKDPQYFGTGVGMAVRPDNKELLAKLNTALEGIKA 229

Query: 242 KGIYQQIQAKYF 253
            G +++I  K+F
Sbjct: 230 NGEFKKINDKWF 241